Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0399 ATGGGTGCTTGTATAAGTAAAAGCCAAAGTTCAAAAGCAAAAGCAAAAGCATATGCACCCTACCCATTTGATGAAAGTTCTGAAACAATTCTTGGGATACCATTTGAACACATTGGTAAGTTCTACACTTTTGGGAAGGAATTAGGGAGGGGCAATTGTGGTGTGACACATTTGTGCATTGAGAGATCAAGTGGATTGCAATATGCATGCAAATCAATCTCAAAGAAGAAGCTTCTAAGCAGAGGTGGTGATTATAAGGATGCCTTAAAGAAGGAGATCCAAGTTATGATGCATTTGAGTGGCCAACCAAATGTTGTTGAGTTCAAAAGTGTTTTTGAGGATTCTCTTTATGTTCATATTGTTATGGAGCTATGTTCAGGTGGCCATCTTCTCCATAGGATTATGCAAAAGGGTCATTACAATGAAAGAGATGCTGCTTCATTGTGTAGAGAAATTGTTACCATTGTTCATCAATGCCATTTCATGGGTGTTATGCATAGGGACCTTAAACCAGAGAATCTCATGTTTTCTACTAGGGGTGAAGATGCAATTCTTAAGGCCATTGATTTTGGCCATGCCTCTTTCATTGAACAAGGAGAGAAATATGCTGATGTTCTTGGGAGTCCATACTATATTGCTCCAGAAGTTCTAAAAGGCAAACATGGAAAGGAAGCAGATATATGGAGTGCAGGAGTTATATTGTATGCCTTACTCAGTGGTATGCCTCCATTTTGGGCAGAGAAAGAAGAGGGAATATTTAGAGCTATACTACTAGGCCGTATCGATTTTGAAAGTCATCCATGGCCAAGAATATCAAAGGATGCTAAAGACCTTGTGTCTAAGATGCTCACACTTGATCCAGAGAAACGCATTACATCTGCTGAAGTTCTAGAGCACAAGTGGATTAAAGAAAATGTGAAGGCTTCTTCTCATCACAAGCCAATGGACAATGCAATCCTTTCCAGAATGAATGCATTCAGAGAAATGAATATGCTAAAGAAACTTTCCCTCAAAGTTATTGCGCAAAATCTTTCTAAAGAAGAGGTCCGAGGTTTGAAGACAATGTTTGCAAATATGGACACTGATAATGATGGTGCAATCACCTCTGAAGAACTGAAGACAGGAATGCAAAAACTTGGTTCAAAGCTTACTGATTCCGAAGCGAAGCAGATTATGGATGCTGTTGATATGGATAGAAATGGCACTTTTGACTGCATAGAGTTCATCACTGCTGCAATGCACAGGCATAGATTAAAAAGAGATCAAAACCTTAACAAGGCCTTCCAATATTTTAATATAGACAAGAGTGGGTTTATTACAAGAGATAATCTGAACACACTCATGGCAGAATTTGGTGCCAATGATGAAGTCACAATCAATGAAATAATATCTCAAATTGATACAGATAATGATGGTAGAATAAGCTATGAAGAATTTTGTACAATGATGAGCTGTTAG 1458 0.382 MGACISKSQSSKAKAKAYAPYPFDESSETILGIPFEHIGKFYTFGKELGRGNCGVTHLCIERSSGLQYACKSISKKKLLSRGGDYKDALKKEIQVMMHLSGQPNVVEFKSVFEDSLYVHIVMELCSGGHLLHRIMQKGHYNERDAASLCREIVTIVHQCHFMGVMHRDLKPENLMFSTRGEDAILKAIDFGHASFIEQGEKYADVLGSPYYIAPEVLKGKHGKEADIWSAGVILYALLSGMPPFWAEKEEGIFRAILLGRIDFESHPWPRISKDAKDLVSKMLTLDPEKRITSAEVLEHKWIKENVKASSHHKPMDNAILSRMNAFREMNMLKKLSLKVIAQNLSKEEVRGLKTMFANMDTDNDGAITSEELKTGMQKLGSKLTDSEAKQIMDAVDMDRNGTFDCIEFITAAMHRHRLKRDQNLNKAFQYFNIDKSGFITRDNLNTLMAEFGANDEVTINEIISQIDTDNDGRISYEEFCTMMSC* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0399 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Ahy17g0399 485 Gene3D Transferase(Phosphotransferase) domain 1 126 325 - -
Ahy17g0399 485 CDD EFh 352 413 IPR002048 GO:0005509
Ahy17g0399 485 ProSiteProfiles EF-hand calcium-binding domain profile. 419 453 IPR002048 GO:0005509
Ahy17g0399 485 SMART serkin_6 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0399 485 CDD EFh 424 484 IPR002048 GO:0005509
Ahy17g0399 485 Gene3D - 326 483 - -
Ahy17g0399 485 Gene3D - 345 413 - -
Ahy17g0399 485 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 8 484 - -
Ahy17g0399 485 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Ahy17g0399 485 SMART efh_1 423 451 IPR002048 GO:0005509
Ahy17g0399 485 SMART efh_1 458 485 IPR002048 GO:0005509
Ahy17g0399 485 SMART efh_1 387 415 IPR002048 GO:0005509
Ahy17g0399 485 SMART efh_1 351 379 IPR002048 GO:0005509
Ahy17g0399 485 SUPERFAMILY EF-hand 343 483 IPR011992 -
Ahy17g0399 485 Pfam EF-hand domain pair 352 411 IPR002048 GO:0005509
Ahy17g0399 485 Pfam EF-hand domain pair 422 484 IPR002048 GO:0005509
Ahy17g0399 485 Gene3D Phosphorylase Kinase; domain 1 33 125 - -
Ahy17g0399 485 ProSiteProfiles Protein kinase domain profile. 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0399 485 SUPERFAMILY Protein kinase-like (PK-like) 31 320 IPR011009 -
Ahy17g0399 485 ProSiteProfiles EF-hand calcium-binding domain profile. 454 485 IPR002048 GO:0005509
Ahy17g0399 485 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 484 - -
Ahy17g0399 485 Pfam Protein kinase domain 42 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g0399 485 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Ahy17g0399 485 CDD STKc_CAMK 41 301 - -
Ahy17g0399 485 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Ahy17g0399 485 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0399 Ahy-Chr17 3859615 3862897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0399 27 483 EF-hand Containing Proteins AT3G20410 61.926 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy17g0399 Pkinase 2.70E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0399 K13412 - nnu:104612808 620.928