Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0375 ATGAAGATGATTGAGGTTTCCCAAATCGCTGCTGAGCAACTTGTTCTCGAACTCAGCAACCCCGATCTCCGAGAAAATGCTCTTCTCGAACTCTCCAAGAAGAGAGAGTTATATCAAGATCTCGCTCTGTTACTGTGGAATTCCTTTGGCACCATTGCAGCGCTTTTACAGGAAATAGTTTCTATATACCCTGTTCTTTCGCCCCCAAATCTTACTCCAGCTCAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATTTGTATCCTTTCCTTAATACAACAAGCAAGTCAAGACCATTTGAATATTTGAGGCTTACTAGCCTTGGTGTCATTGGTGCTTTAGTGAAGGTTGATGATACGGAAGTTATAAGTTTCCTTCTTTCAACAGAAATAATTCCGTTGTGCCTTCGCACTATGGAACTGGGAAGTGAATTGTCAAAAACAGTTGCAACCTTTATAGTTCAGAAAATTCTTTTGGATGATGTGGGTTTGGATTATGTTTGTACCACAGCGGAACGCTTTTTTGCAGTAGGTCGAGTTCTGGGGAACATGGTGGCAGCTCTGGCTGAGCAACCCTCATCTCGCCTTTTGAAGCACATTATTCGTTGCTATCTTCGTCTATCCGATAATCGGAGGTTGGATAACAGGGCTTGTGATGCACTAAGAAGCTGTCTTCCGGAGATGTTAAGAGATGCTACTTTTAATACCTGCCTTCGTGAAGACCAAACAACTAGGAGGTGGCTACAGCAGTTGCTTCACAATGTTGGAGTGAATAGGGTTCCTCCACTACAAGCCGGAGCAGGATTCGATCATAATATGATGGTGGCGTGA 894 0.434 MKMIEVSQIAAEQLVLELSNPDLRENALLELSKKRELYQDLALLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMELGSELSKTVATFIVQKILLDDVGLDYVCTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNRRLDNRACDALRSCLPEMLRDATFNTCLREDQTTRRWLQQLLHNVGVNRVPPLQAGAGFDHNMMVA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0375 297 Gene3D - 4 277 IPR011989 -
Ahy17g0375 297 SUPERFAMILY ARM repeat 16 236 IPR016024 -
Ahy17g0375 297 PANTHER BNAA05G20110D PROTEIN 10 293 - -
Ahy17g0375 297 Pfam Cell differentiation family, Rcd1-like 14 276 - -
Ahy17g0375 297 PANTHER UNCHARACTERIZED 10 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0375 Ahy-Chr17 3666308 3669830 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Ahy17g0375 Rcd1 9.40E-127 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0375 K12606 - gmx:100784529 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0375 17 3666308 3669830 Ahy7g0247 7 1943667 1947234 hybridization
Ahy17g0375 17 3666308 3669830 Ahy17g0375 17 3666308 3669830 PCT
Ahy17g0375 17 3666308 3669830 Ahy7g0247 7 1943667 1947234 PCT
Ahy7g0247 7 1943667 1947234 Ahy17g0375 17 3666308 3669830 PCT