Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0352 ATGATCAACATGGAAACCGCATGGAATAATGATAATGATGATGGCATTGACATGATGGATAAGTCTAGTCATCATCATCATTATCATCATCATCATGATCATGATCATCCACATTCTTCCTTCACTGACCTACATCATCATCATCACCATCATCAGGTCATTGATGAGATGGATTTCTTCGCTGAGAACAAGAACAAAAATGATAACAACAACATCCATGATAATATCCAAGATGATCATGATAATAATGATCATGATCATGATGAAATGGTGCACAGTTCTATGGAGCTTCATGTAGATACTAGCTTAGATCTTCGTATGAAGAACACAGATGGCAATAGCTCATCAATGGAACCATCAGAAACTATGGATGACAAGAAGAGTAATGATTTGGGATTGCTAGCAGAATTGCAACACGTGAATGCTGAAAATCAAAGATTGAGAGAGCTTATTGAAGAACTTAACAATAACTATAACACCTTACACATGCAACTTATCAACCTCATGCAGCAAAGGGATCAAAATCATGCGATGAAGCAAGACATAGAGGAGAAAAGTAAGAAGGAAGATATGGTGGGAAGAACATTCCTAGACATGGGTGTTGCTGGTTTTGGTGAAAAGGATAATGATCCTTCTCAACAATCTTCAGATATCAAACTTGGAGCAGGAGGAGAAAGCAAAAGCATGGTTGATAATAATAATAATAATATTGTTTTGGAGAAAGACAATAATAATAATAAAGTTGATGGTGGAAACAGAGAGAGAAACACAACAATGGTTACTGATGAAGGATTATCAGGTTGGCTCTCTAACAAGGTTTCAACGAGGTTGAATTCTTTCAGGGATGTTGATCAAGCTTCTGAAACCATGTCTATGATCAAGAAAGCACGTGTATCAGTGAGAGCAAGATCAGAATCTTCCATGATTGCAGACGGATGCCAATGGCGAAAGTATGGACAGAAAATGGCAAAAGGAAATCCATGTCCGCGAGCTTATTATCGTTGCACCATGAGTACTGGTTGTCCTGTTCGCAAACAAGTACAAAGGTGTGCTGAAGATAGAAGTGTGTTGATAACAACATATGAAGGCCAACACAACCATCCACTCCCTCCAACTGCCAAGGCAATGGCCTCAACCACCTCTGCCGCCGCCTCCATGCTCCTCTCCGGTTCGATGCCAAGCGCCGACGGCCTAATCAACCCCACCATACTCGAAAGCGCCACCCTTCCTTGCTCTCAAAACATGGCTACACTCTCAGCTTCAGCTCCATTTCCAACCATAACTTTGGACCTAACACAAACCGCCACAAATAATAATAACAATAATAACAACAACAACTTTAACCCAAATTCTTTAAGGGATTTGCCTAATAATCAAAGCCAACAACTTAGTCTCTTAACACCCCTTTTGGCTCAGAAATTTATGTCAGCTCCAAACATGTTTGGACATGTTCTTAATGGTGATCAAAGCAAGATTATTTCAGGATTACAAGGATCAATTGACACAACAACAACAGGTTCATCTTTTGCTGATACAATAAATGCTGCAACTGCTGCTATCACTGCTGATCCTAATTTCACTTCAGCTCTTGTTGCTGCCATATCTTCCATCATTGGAAATTCAACACATCATCATCAAAGCAGTAACAATAATGATGCATGA 1662 0.3953 MINMETAWNNDNDDGIDMMDKSSHHHHYHHHHDHDHPHSSFTDLHHHHHHHQVIDEMDFFAENKNKNDNNNIHDNIQDDHDNNDHDHDEMVHSSMELHVDTSLDLRMKNTDGNSSSMEPSETMDDKKSNDLGLLAELQHVNAENQRLRELIEELNNNYNTLHMQLINLMQQRDQNHAMKQDIEEKSKKEDMVGRTFLDMGVAGFGEKDNDPSQQSSDIKLGAGGESKSMVDNNNNNIVLEKDNNNNKVDGGNRERNTTMVTDEGLSGWLSNKVSTRLNSFRDVDQASETMSMIKKARVSVRARSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAKAMASTTSAAASMLLSGSMPSADGLINPTILESATLPCSQNMATLSASAPFPTITLDLTQTATNNNNNNNNNNFNPNSLRDLPNNQSQQLSLLTPLLAQKFMSAPNMFGHVLNGDQSKIISGLQGSIDTTTTGSSFADTINAATAAITADPNFTSALVAAISSIIGNSTHHHQSSNNNDA* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0352 553 MobiDBLite consensus disorder prediction 208 263 - -
Ahy17g0352 553 SMART WRKY_cls 309 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0352 553 MobiDBLite consensus disorder prediction 63 83 - -
Ahy17g0352 553 MobiDBLite consensus disorder prediction 19 49 - -
Ahy17g0352 553 SUPERFAMILY WRKY DNA-binding domain 302 370 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0352 553 Coils Coil 137 188 - -
Ahy17g0352 553 Gene3D WRKY domain 294 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy17g0352 553 MobiDBLite consensus disorder prediction 35 49 - -
Ahy17g0352 553 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 548 IPR044810 GO:0003700
Ahy17g0352 553 MobiDBLite consensus disorder prediction 203 263 - -
Ahy17g0352 553 ProSiteProfiles WRKY domain profile. 304 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy17g0352 553 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 37 548 - -
Ahy17g0352 553 Pfam WRKY DNA -binding domain 311 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0352 Ahy-Chr17 3202087 3207491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0352 51 551 WRKY Transcription Factor Family AT1G62300 44.256 1.31e-107 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy17g0352 WRKY 1.90E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0352 - - adu:107496306 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0352 17 3202087 3207491 Ahy17g0352 17 3202087 3207491 ECH
Ahy17g0352 17 3202087 3207491 Ahy14g0484 14 6391828 6394299 ECH
Ahy17g0352 17 3202087 3207491 Ahy7g0242 7 1876286 1880717 hybridization
Ahy17g0497 17 4838230 4840745 Ahy17g0352 17 3202087 3207491 PCT
Ahy7g0353 7 2920864 2923397 Ahy17g0352 17 3202087 3207491 PCT
Ahy17g0352 17 3202087 3207491 Ahy17g0352 17 3202087 3207491 PCT
Ahy17g0352 17 3202087 3207491 Ahy7g0242 7 1876286 1880717 PCT
Ahy7g0242 7 1876286 1880717 Ahy17g0352 17 3202087 3207491 PCT