Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0331 ATGGAAACGACGTCGCACGCGGACCTCCACCAACCACCGCTCACTCCTGCCTCCAATCTCCCCGTCGAGAACGGCGGACCTCGGGAATCACACCATGACGATGACCGCTGCGCCAAGAAGCCTAAGCTCGAGGAACATGTTGACGATGGTGGTGGTGGTGGTGCTGGAGGAGGAGGAGGGGAATTGAAGAGAGTGGCGGAGATTGTGCTTGTTTTGTCGACGATGGCGACGATGCGGGCGGGTCGGAAACCTACCGACGTGGAGGTGGAGCTTATGAGGGAGGCTCGGAGCAAGCTCGCCGAACTCTGCGTAGGGCTCGCGCCGAAGGATATCGTTGGGAGGGAAGCGATTGGGACGGTGATTGAGGATCTTGGATTGAACGGCAGGGTTAGGGATCAGAGGTTAGGGTTTCGAACTCCAAAGATGTCAATTGCTGAGAGGTATACGCATGCTAAGTGGAAGATGGAAGAAGCAAAGAGGTATGCTGCACCTTCTACAACGTACACATCTCAGCCTGTGCAACCAAGTACCAGTGTAACAGCTGACAACCGTGTGGCTCCACATGGTGTTCGTGTGTTTGCACCTGATAATTCAAGCCACATAGCGATCCCTTCTTCGGCAACAACGGTGTCTATTCCTTCTCATGTTTCTGCAGGATCGTCTTCTACGTCGCAATATCAGTCGACTAGCAATGAAGTAAGACCACCTATGGTTTCTGGTGCAATACCTAGCACTCATCTCGGGAGAAATTCATCTCCGATGGTAGTGCCTAAACTTGAAAACCCACAGGTCAGAGCTGATGGAGGATCAAATGGATCTTCTTATGTGCTTAGTATACCAGCAAATTCATCAGCAAACCAACCTTTGGCAAATGCTCCACCATGGTCAATACAGACTCAATCTGCGTCGTTAGCTAGAACAGCATTGGAAAACAAGGTGCCTGCTCATAACACTGTCAAGGTACAAGGAACAAGTGATGTAGCTGCTTCAAGGGCAGGTTCACAAATAACAGCAGATCAGAGCTTTAGGCCATTTATTACTCAAACAGCACCTGTAAACTTGTCTACTATGCAACAGTCTTTCCAGGGTATGAACGTTGCTCAGCCTCCTTCAATTCCTACTCATGCTGAAATTGCAAAGATTGTCCAGAAATTGTTACAACCAAAGCTTCCTGAGCATCCGACATGGACTCCTCCATCAAGGGATTATATGAATAAGGCTTTGACTTGTCAGGTGTGTGAACTCACTGTCAATGAGGTTGATACTGTGCTTCTCTGTGATGCTTGTGAAAAGGGATATCACTTGAAGTGTTTGCAGCCCTCGGTTTTAAGAGGAATTCATAATAGAGTGGATTGGCATTGCATGAGGTGTTTGAATTTAAGCGGTGGAAAGCCTATACCTCCAAAATATGGTCGTGTCATGAGATCATCAAACACACCACCGAAATTGCCCACTACGGTTGGAGTTCAGCAACCTTCTGAGAAGAAAACAGGGAGCTTAGATCCAAAGGTCAGCCAGCAGAATTTAACAACAAATGGGAGCACTGTTCCAATAGTTGCTACCAGCAATGTCAAAGTTGAGTCGCCATCTGATTCAAAGACTCCTGGTACAAAGGATATACATGGTACCGGATCATCCAACACGGAACATATTGATCAGAAGCCTGACCCAAACATCTCTATGAAATCCCTTAATGCAGCTTCTGTTCCTTCCGTTGACTTTCCTGGTGAAAGTTCTGCTCAACAAATTAATCCTGAGCCTTCAACCTGTAAAGAGAGTTCAACCTCTAAAGAGTGTTTCGATTCCAAGACCCTTCCTAAATTATCTGAGCCAGGTGAATGTGACAATTTGCAATCATCACAAGACTTTCAAGCTGAGCAGAAAGTGTCACAGGGCAATGCTGTAGTATTATCGGATAAAAAAGTTGACAGTAGTTTAATGAGTAATGAACAAAAGGAATCACAATCAGGAGAAAGCTCAACTTATGATACCAAGCGAGATGGCCAAGATGTTGCACTAGCAAACTTTGATGGGAGTTCTGGAACTAATGCTGAAGTTAGACAACACTGTGCGTTATCTTCAGATAGCTCGCAAGCTGTAGAATGGATTGGTGATGTTATACACATTGTTGATGAGAAAAAGTTTTACAAATCTTGCTGTGTTGATGGAGTAACCTATAGGCTTCATAGTCATGCTCTTCTCCCATCTGGCCATGGCAAATTAGCACCTTCTAAACTTCAGTCTATGTGGGAAGACTGCAAAACTGGGTTAAAGTGGGTTAAGGTGACGAAATGCTACTTTCCTGGTGATTTGCCTGGGAACATTGGTCATCCGTGTATATCCGAAGTTAACGAGGTTTATGAATCTAATAGTGAAAGAACTGAAAAGGCTAGCTCTATTCGAGGTCCATGTGAAGTCCTTCCATCTGATAAATTTAATCAAGAAAACGACAGACGAAATCAGTTAGGAATTGAGGCAAATGCTAGAATCCAGCCACTTTTTGTTTGCAGGTGGTTTTATGATGAAATCAAAAAGTTATTTCAGCCTGTTACCAGTTGA 2559 0.4517 METTSHADLHQPPLTPASNLPVENGGPRESHHDDDRCAKKPKLEEHVDDGGGGGAGGGGGELKRVAEIVLVLSTMATMRAGRKPTDVEVELMREARSKLAELCVGLAPKDIVGREAIGTVIEDLGLNGRVRDQRLGFRTPKMSIAERYTHAKWKMEEAKRYAAPSTTYTSQPVQPSTSVTADNRVAPHGVRVFAPDNSSHIAIPSSATTVSIPSHVSAGSSSTSQYQSTSNEVRPPMVSGAIPSTHLGRNSSPMVVPKLENPQVRADGGSNGSSYVLSIPANSSANQPLANAPPWSIQTQSASLARTALENKVPAHNTVKVQGTSDVAASRAGSQITADQSFRPFITQTAPVNLSTMQQSFQGMNVAQPPSIPTHAEIAKIVQKLLQPKLPEHPTWTPPSRDYMNKALTCQVCELTVNEVDTVLLCDACEKGYHLKCLQPSVLRGIHNRVDWHCMRCLNLSGGKPIPPKYGRVMRSSNTPPKLPTTVGVQQPSEKKTGSLDPKVSQQNLTTNGSTVPIVATSNVKVESPSDSKTPGTKDIHGTGSSNTEHIDQKPDPNISMKSLNAASVPSVDFPGESSAQQINPEPSTCKESSTSKECFDSKTLPKLSEPGECDNLQSSQDFQAEQKVSQGNAVVLSDKKVDSSLMSNEQKESQSGESSTYDTKRDGQDVALANFDGSSGTNAEVRQHCALSSDSSQAVEWIGDVIHIVDEKKFYKSCCVDGVTYRLHSHALLPSGHGKLAPSKLQSMWEDCKTGLKWVKVTKCYFPGDLPGNIGHPCISEVNEVYESNSERTEKASSIRGPCEVLPSDKFNQENDRRNQLGIEANARIQPLFVCRWFYDEIKKLFQPVTS* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0331 852 MobiDBLite consensus disorder prediction 478 602 - -
Ahy17g0331 852 SMART PHD_3 409 458 IPR001965 -
Ahy17g0331 852 ProSiteProfiles Zinc finger PHD-type profile. 407 460 IPR019787 -
Ahy17g0331 852 ProSiteProfiles BAH domain profile. 724 851 IPR001025 GO:0003682
Ahy17g0331 852 MobiDBLite consensus disorder prediction 26 49 - -
Ahy17g0331 852 Gene3D - 693 852 IPR043151 -
Ahy17g0331 852 Gene3D - 343 460 - -
Ahy17g0331 852 MobiDBLite consensus disorder prediction 212 234 - -
Ahy17g0331 852 MobiDBLite consensus disorder prediction 640 666 - -
Ahy17g0331 852 SUPERFAMILY FYVE/PHD zinc finger 400 465 IPR011011 -
Ahy17g0331 852 Pfam PHD-finger 410 458 IPR019787 -
Ahy17g0331 852 MobiDBLite consensus disorder prediction 640 658 - -
Ahy17g0331 852 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 851 - -
Ahy17g0331 852 ProSitePatterns Zinc finger PHD-type signature. 410 457 IPR019786 -
Ahy17g0331 852 MobiDBLite consensus disorder prediction 1 59 - -
Ahy17g0331 852 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 851 - -
Ahy17g0331 852 MobiDBLite consensus disorder prediction 475 604 - -
Ahy17g0331 852 CDD BAH 723 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0331 Ahy-Chr17 3028858 3034066 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy17g0331 PHD 1.00E-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0331 - - aip:107609239 1692.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0331 17 3028858 3034066 Ahy17g0331 17 3028858 3034066 ECH
Ahy17g0331 17 3028858 3034066 Ahy7g0219 7 1695302 1700421 hybridization