Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy17g0331 | ATGGAAACGACGTCGCACGCGGACCTCCACCAACCACCGCTCACTCCTGCCTCCAATCTCCCCGTCGAGAACGGCGGACCTCGGGAATCACACCATGACGATGACCGCTGCGCCAAGAAGCCTAAGCTCGAGGAACATGTTGACGATGGTGGTGGTGGTGGTGCTGGAGGAGGAGGAGGGGAATTGAAGAGAGTGGCGGAGATTGTGCTTGTTTTGTCGACGATGGCGACGATGCGGGCGGGTCGGAAACCTACCGACGTGGAGGTGGAGCTTATGAGGGAGGCTCGGAGCAAGCTCGCCGAACTCTGCGTAGGGCTCGCGCCGAAGGATATCGTTGGGAGGGAAGCGATTGGGACGGTGATTGAGGATCTTGGATTGAACGGCAGGGTTAGGGATCAGAGGTTAGGGTTTCGAACTCCAAAGATGTCAATTGCTGAGAGGTATACGCATGCTAAGTGGAAGATGGAAGAAGCAAAGAGGTATGCTGCACCTTCTACAACGTACACATCTCAGCCTGTGCAACCAAGTACCAGTGTAACAGCTGACAACCGTGTGGCTCCACATGGTGTTCGTGTGTTTGCACCTGATAATTCAAGCCACATAGCGATCCCTTCTTCGGCAACAACGGTGTCTATTCCTTCTCATGTTTCTGCAGGATCGTCTTCTACGTCGCAATATCAGTCGACTAGCAATGAAGTAAGACCACCTATGGTTTCTGGTGCAATACCTAGCACTCATCTCGGGAGAAATTCATCTCCGATGGTAGTGCCTAAACTTGAAAACCCACAGGTCAGAGCTGATGGAGGATCAAATGGATCTTCTTATGTGCTTAGTATACCAGCAAATTCATCAGCAAACCAACCTTTGGCAAATGCTCCACCATGGTCAATACAGACTCAATCTGCGTCGTTAGCTAGAACAGCATTGGAAAACAAGGTGCCTGCTCATAACACTGTCAAGGTACAAGGAACAAGTGATGTAGCTGCTTCAAGGGCAGGTTCACAAATAACAGCAGATCAGAGCTTTAGGCCATTTATTACTCAAACAGCACCTGTAAACTTGTCTACTATGCAACAGTCTTTCCAGGGTATGAACGTTGCTCAGCCTCCTTCAATTCCTACTCATGCTGAAATTGCAAAGATTGTCCAGAAATTGTTACAACCAAAGCTTCCTGAGCATCCGACATGGACTCCTCCATCAAGGGATTATATGAATAAGGCTTTGACTTGTCAGGTGTGTGAACTCACTGTCAATGAGGTTGATACTGTGCTTCTCTGTGATGCTTGTGAAAAGGGATATCACTTGAAGTGTTTGCAGCCCTCGGTTTTAAGAGGAATTCATAATAGAGTGGATTGGCATTGCATGAGGTGTTTGAATTTAAGCGGTGGAAAGCCTATACCTCCAAAATATGGTCGTGTCATGAGATCATCAAACACACCACCGAAATTGCCCACTACGGTTGGAGTTCAGCAACCTTCTGAGAAGAAAACAGGGAGCTTAGATCCAAAGGTCAGCCAGCAGAATTTAACAACAAATGGGAGCACTGTTCCAATAGTTGCTACCAGCAATGTCAAAGTTGAGTCGCCATCTGATTCAAAGACTCCTGGTACAAAGGATATACATGGTACCGGATCATCCAACACGGAACATATTGATCAGAAGCCTGACCCAAACATCTCTATGAAATCCCTTAATGCAGCTTCTGTTCCTTCCGTTGACTTTCCTGGTGAAAGTTCTGCTCAACAAATTAATCCTGAGCCTTCAACCTGTAAAGAGAGTTCAACCTCTAAAGAGTGTTTCGATTCCAAGACCCTTCCTAAATTATCTGAGCCAGGTGAATGTGACAATTTGCAATCATCACAAGACTTTCAAGCTGAGCAGAAAGTGTCACAGGGCAATGCTGTAGTATTATCGGATAAAAAAGTTGACAGTAGTTTAATGAGTAATGAACAAAAGGAATCACAATCAGGAGAAAGCTCAACTTATGATACCAAGCGAGATGGCCAAGATGTTGCACTAGCAAACTTTGATGGGAGTTCTGGAACTAATGCTGAAGTTAGACAACACTGTGCGTTATCTTCAGATAGCTCGCAAGCTGTAGAATGGATTGGTGATGTTATACACATTGTTGATGAGAAAAAGTTTTACAAATCTTGCTGTGTTGATGGAGTAACCTATAGGCTTCATAGTCATGCTCTTCTCCCATCTGGCCATGGCAAATTAGCACCTTCTAAACTTCAGTCTATGTGGGAAGACTGCAAAACTGGGTTAAAGTGGGTTAAGGTGACGAAATGCTACTTTCCTGGTGATTTGCCTGGGAACATTGGTCATCCGTGTATATCCGAAGTTAACGAGGTTTATGAATCTAATAGTGAAAGAACTGAAAAGGCTAGCTCTATTCGAGGTCCATGTGAAGTCCTTCCATCTGATAAATTTAATCAAGAAAACGACAGACGAAATCAGTTAGGAATTGAGGCAAATGCTAGAATCCAGCCACTTTTTGTTTGCAGGTGGTTTTATGATGAAATCAAAAAGTTATTTCAGCCTGTTACCAGTTGA | 2559 | 0.4517 | METTSHADLHQPPLTPASNLPVENGGPRESHHDDDRCAKKPKLEEHVDDGGGGGAGGGGGELKRVAEIVLVLSTMATMRAGRKPTDVEVELMREARSKLAELCVGLAPKDIVGREAIGTVIEDLGLNGRVRDQRLGFRTPKMSIAERYTHAKWKMEEAKRYAAPSTTYTSQPVQPSTSVTADNRVAPHGVRVFAPDNSSHIAIPSSATTVSIPSHVSAGSSSTSQYQSTSNEVRPPMVSGAIPSTHLGRNSSPMVVPKLENPQVRADGGSNGSSYVLSIPANSSANQPLANAPPWSIQTQSASLARTALENKVPAHNTVKVQGTSDVAASRAGSQITADQSFRPFITQTAPVNLSTMQQSFQGMNVAQPPSIPTHAEIAKIVQKLLQPKLPEHPTWTPPSRDYMNKALTCQVCELTVNEVDTVLLCDACEKGYHLKCLQPSVLRGIHNRVDWHCMRCLNLSGGKPIPPKYGRVMRSSNTPPKLPTTVGVQQPSEKKTGSLDPKVSQQNLTTNGSTVPIVATSNVKVESPSDSKTPGTKDIHGTGSSNTEHIDQKPDPNISMKSLNAASVPSVDFPGESSAQQINPEPSTCKESSTSKECFDSKTLPKLSEPGECDNLQSSQDFQAEQKVSQGNAVVLSDKKVDSSLMSNEQKESQSGESSTYDTKRDGQDVALANFDGSSGTNAEVRQHCALSSDSSQAVEWIGDVIHIVDEKKFYKSCCVDGVTYRLHSHALLPSGHGKLAPSKLQSMWEDCKTGLKWVKVTKCYFPGDLPGNIGHPCISEVNEVYESNSERTEKASSIRGPCEVLPSDKFNQENDRRNQLGIEANARIQPLFVCRWFYDEIKKLFQPVTS* | 853 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 478 | 602 | - | - | |
Ahy17g0331 | 852 | SMART | PHD_3 | 409 | 458 | IPR001965 | - | |
Ahy17g0331 | 852 | ProSiteProfiles | Zinc finger PHD-type profile. | 407 | 460 | IPR019787 | - | |
Ahy17g0331 | 852 | ProSiteProfiles | BAH domain profile. | 724 | 851 | IPR001025 | GO:0003682 | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Ahy17g0331 | 852 | Gene3D | - | 693 | 852 | IPR043151 | - | |
Ahy17g0331 | 852 | Gene3D | - | 343 | 460 | - | - | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 212 | 234 | - | - | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 640 | 666 | - | - | |
Ahy17g0331 | 852 | SUPERFAMILY | FYVE/PHD zinc finger | 400 | 465 | IPR011011 | - | |
Ahy17g0331 | 852 | Pfam | PHD-finger | 410 | 458 | IPR019787 | - | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 640 | 658 | - | - | |
Ahy17g0331 | 852 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 19 | 851 | - | - | |
Ahy17g0331 | 852 | ProSitePatterns | Zinc finger PHD-type signature. | 410 | 457 | IPR019786 | - | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Ahy17g0331 | 852 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 19 | 851 | - | - | |
Ahy17g0331 | 852 | MobiDBLite | consensus disorder prediction | 475 | 604 | - | - | |
Ahy17g0331 | 852 | CDD | BAH | 723 | 851 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy17g0331 | Ahy-Chr17 | 3028858 | 3034066 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Ahy17g0331 | PHD | 1.00E-07 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy17g0331 | - | - | aip:107609239 | 1692.55 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy17g0331 | 17 | 3028858 | 3034066 | Ahy17g0331 | 17 | 3028858 | 3034066 | ECH | |
Ahy17g0331 | 17 | 3028858 | 3034066 | Ahy7g0219 | 7 | 1695302 | 1700421 | hybridization |