Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0327 ATGGCATCTGCTTTAGACTCATGGGTGAAGGAATACAATGAAGCGGTGAAACTTGGTGATGATATTACAGCCATGATGTCCGGGCGGAACTCGGTTCCGTCGTCCGGGCCTGAAACCCAGCGTCACACATCTGCTATAAGAAGGAAGATTACAATATTGGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCTAAGCTTCCTGCAAAACAAGCTATATCTGAGAAGGAGATGAATCGCCGCAAGGATATGATTGCAAATTTGAGATCTAAAGTTAACCAAATGGCTTCCACTTTGAACATGTCAAACTTTGAAAATAGAGACCTTTTGCTTGGGCCAGAAACAAAGCCAGATGCCATGAGCAGAACAACTGGCCTGGACAACAACCAACTTGTTGGATTTCAACGGCAAATTATGAAAGAACAAGACAATGGCCTTGCAAAATTGGAGGAGACTGTACTAAGCACCAAACATATTGCACTTGCTGTCAATGAAGAGTTGGATCTACACACTAGACTTATTGATGACTTGGACCAACATGTAGATGTTACAAATTCTCGGATGAGGTGGGTGCAGAAGAAATTGTCAATTGTAAATAAACGAACCAAGGGTGGTTGCTCCTGCTGGTGCTTACTTTTATCAGTGGTTGGCATTGTGGGTTTGCTTCTTGTCATTTGGATTTTGCTCGTTCATTTGTAA 699 0.4263 MASALDSWVKEYNEAVKLGDDITAMMSGRNSVPSSGPETQRHTSAIRRKITILGTRLDSLQSLLSKLPAKQAISEKEMNRRKDMIANLRSKVNQMASTLNMSNFENRDLLLGPETKPDAMSRTTGLDNNQLVGFQRQIMKEQDNGLAKLEETVLSTKHIALAVNEELDLHTRLIDDLDQHVDVTNSRMRWVQKKLSIVNKRTKGGCSCWCLLLSVVGIVGLLLVIWILLVHL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0327 232 Gene3D - 138 200 - -
Ahy17g0327 232 Pfam SNARE domain 173 224 IPR000727 -
Ahy17g0327 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Ahy17g0327 232 SUPERFAMILY t-snare proteins 30 100 IPR010989 GO:0016020|GO:0016192
Ahy17g0327 232 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
Ahy17g0327 232 SUPERFAMILY SNARE fusion complex 127 197 - -
Ahy17g0327 232 CDD SNARE_Qc 139 196 - -
Ahy17g0327 232 PANTHER SYNTAXIN 1 227 IPR045242 -
Ahy17g0327 232 SMART tSNARE_6 131 198 IPR000727 -
Ahy17g0327 232 Gene3D - 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0327 Ahy-Chr17 3013551 3016198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0327 1 232 SNARE and Associated Proteins AT1G79590 67.811 6.03e-113 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0327 K08503 - gmx:100782666 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0327 17 3013551 3016198 Ahy17g0327 17 3013551 3016198 ECH
Ahy17g0327 17 3013551 3016198 Ahy7g0215 7 1678453 1681186 hybridization
Ahy17g0327 17 3013551 3016198 Ahy17g0327 17 3013551 3016198 PCT
Ahy17g0327 17 3013551 3016198 Ahy7g0215 7 1678453 1681186 PCT
Ahy7g0215 7 1678453 1681186 Ahy17g0327 17 3013551 3016198 PCT