Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0325 ATGGGGTTCTTGGTGACGACGCTGATCTTCTTGGTCGTTGGAATCATTGCGTGCCTTTGCACCCGAATTTGCTGCAACCGAGGACCCTCCACTAATCTATTTCACCTTACTTTGGTTATTACTGCCACAATATGTTGCTGGATGATGTGGGCAATCGTATATCTGGCACAGATGAACCCTCTCATAGTACCTGTGCTGAATGAGGGTGAATAA 213 0.4648 MGFLVTTLIFLVVGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMNPLIVPVLNEGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0325 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 70 IPR008389 GO:0033179|GO:0046961|GO:1902600
Ahy17g0325 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Ahy17g0325 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0325 Ahy-Chr17 3007789 3009888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0325 1 70 Primary Pumps ATPases(2) AT5G55290 85.714 1.05e-40 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0325 K02153 - gmx:100781475 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0325 17 3007789 3009888 Ahy17g0325 17 3007789 3009888 ECH
Ahy17g0325 17 3007789 3009888 Ahy7g0213 7 1673163 1675279 hybridization