Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0306 ATGGTTTCCATATTCTCTCTCTATCCCTGCAATCCCCTCCTCTATTCTTCTTCTTCTTCCTTTCGGAACTTTGTTGAATGGCATTTCAATCCGAGTTCGAGTTCGAATTCGAATTCTGCGTCTTCATCCATTGACGGAAGAGGAGGTGGTGGCGGTGGCAGCAAGGTGCTGCTTGTGATTGCTGCGGCGCATTCCAATCCAAACATTCTCAAGACCAACCGCAAGTCTAAGTACGGTTACCCTCTCTCTACCTACGATTCCGACGACGACGACGAGGACGACGACGACGAGGACGGTGATTGGCTCTCTGATGAAGAATTTGCTGAGCCTGCTCGCTTGGACACTAATGGCAAGAGATCTAAGTTGCATGCAAGTAAAGGAAAAGAAAGACAAAATGAAAAGGAATGGGGTGTAAGAGATTTTGATAATGAACCAAGCACTAGAATTCGCGGAAGCGAGGGAGTGGCATCTTTACGGCGAAACTACAATGGAAAGCTTGATAAGAACTTAAAGGAGAAGAAATATCCACGGCTGTCGGAAGAGATTATCTTGGATTCGAAATGGTTACCGCTTCTTGATTACTTAAGCACCTTTGGAATCAAGGAGTCACACTTCGTCCAGATGTATCAGAGGCACATGCCGTCACTTCAAATCAATGTATGCTCTGCACAGGAGAGGTTAGATTACTTAATGAGTGTCGGTGTCAAACATAGAGATGTTAGAAGAATCCTTGTGAGGCAGCCTCAGATTCTGGGGTATACGGTGGAGAACAATTTGAAGTCTCATGTTGCTTTCTTGGCAGGCTTGGGAATACCAAGTTCCAGGATAGGGCAAATCATTGCCGTCGCTCCATCGCTTTTTTCTTATAGTGTTGAAAATTCATTAAAACCGACAGTAAGATATTTAGTTGAGGAAGTTGGAATCAAGGAAAGAGACTTGGGTAAGGTCATTCAGCTAAGCCCACAAATTCTTGTCCAGCGCATTGACGTTTCATGGAATACTCGATACATGTTTCTAACCAAAGAGTTGGGAGCACCCAAAGATAGCATAGTGAAGATGGTGACGAAACATCCTCAGCTTCTCCACTACAGCATAGATGATGGATTACTTCCAAGGATAAACTTCCTAAGAAGCATAGGAATGAAAAATTCAGACATCTTGAAAGTATTGACTAGTCTTACACAGGTGCTATCTCTGTCCCTAGAGGACAATCTGAAGCCCAAGTATTTGTACTTGGTAAATGAACTCAACAATGAGGTGCAATCCTTGACCAAATACCCAATGTACCTTAGCTTGTCTTTGGACCAAAGAATCCGTCCTCGTCATAGGTTCTTGGTTTCCTTGAAGAAAGCTCCGAAAGGACCCTTTCCACTTGGATCTCTTGTTCCAACTGATGAATGCTTTTGTCAACAGTGGGCTGGAACTAGTTTGGATAAATATTTGGCATTTCGTCAAAGATTATTAGTCAGAAGGTTTGCCGAGAAATTCGAAAGAAAAATGTGA 1503 0.4325 MVSIFSLYPCNPLLYSSSSSFRNFVEWHFNPSSSSNSNSASSSIDGRGGGGGGSKVLLVIAAAHSNPNILKTNRKSKYGYPLSTYDSDDDDEDDDDEDGDWLSDEEFAEPARLDTNGKRSKLHASKGKERQNEKEWGVRDFDNEPSTRIRGSEGVASLRRNYNGKLDKNLKEKKYPRLSEEIILDSKWLPLLDYLSTFGIKESHFVQMYQRHMPSLQINVCSAQERLDYLMSVGVKHRDVRRILVRQPQILGYTVENNLKSHVAFLAGLGIPSSRIGQIIAVAPSLFSYSVENSLKPTVRYLVEEVGIKERDLGKVIQLSPQILVQRIDVSWNTRYMFLTKELGAPKDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDILKVLTSLTQVLSLSLEDNLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLVRRFAEKFERKM* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0306 500 Pfam mTERF 175 447 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 420 451 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 387 419 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 351 382 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 241 272 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 277 309 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 SMART mt_12 314 346 IPR003690 GO:0003690|GO:0006355
Ahy17g0306 500 Gene3D Transcription termination factor 3, mitochondrial 252 487 IPR038538 -
Ahy17g0306 500 MobiDBLite consensus disorder prediction 85 104 - -
Ahy17g0306 500 MobiDBLite consensus disorder prediction 80 136 - -
Ahy17g0306 500 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 49 492 - -
Ahy17g0306 500 MobiDBLite consensus disorder prediction 105 136 - -
Ahy17g0306 500 PANTHER CGI-12 PROTEIN-RELATED 49 492 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0306 Ahy-Chr17 2870760 2873631 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy17g0306 mTERF 1.40E-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0306 K15032 - gmx:100809638 722.235