Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0270 ATGTGGTTTGTTTCATCTTTATTTTCTTCTCTCATGCACTTTCCCACTTGTTTTCTACTCAAACCCATTTTCCTTCATGCCTTGTCTTCCTTTTTCCATCTTCTATTGTTGGCAATGGTTTTGGTGACATTGCTTTGTAAGAGAATCATCACAGTAGAATCCAAAGATAAGAAAACTAATAATAATAATAAAGCTTTGTTTCAAAAGACTCTGTTTTGTTCTGTTGGTTTTTCAGCTTTCAACCTTTTCCTCTCTCTCATCGACTACTTCATTTGGTATAGAACTAGTTTGTCACAAGAAAAGCTTTTTACCCTTTTGGATTTGGCTCTCAAAACCGTTTCTTGGGGTGTTCTTGCTATTTCCATGCATAATGATCATATAAGATTTCCCTTACTACTATTCAGAATTTGGTGTGCCTTCTACCTGTTTGTTTCTTGTTCTTCCTTTATAGTGGACATCATTGTTCTTATTCTATACAAAAAACATGTTCCTTTACCACCTCAGTGCATAGTTTCTGATGTGGTAGCTACTCTTGTTGGCTTGTTTTTCTGTTATGTTATGTGTTATGTGAAGAATGATGAGTGTGAAGATATCAGCACCATTGAGGAACCTCTATTGAATGGTGATGATCATGCTTCTTCCATGGAGAAAAAAGAGACTAATAGAGGGGGAGAAACCGTTACGCCTTATTTGAATGCTGGAATTTTCAGCATTCTAACATTCTCTTGGATTGGTTCTCTTATAGCTCTTGGTAATAAGAAAATCTTAGACCTTGAGGATGTTCCACAACTAGATTCCGGAGACAGTGTTGTTGAAGCTTTTCCAGCTTTCAAGGAAAAGGTTGAAGCAGATTGTGGTGGAACAAACCACATAACCACTCTTAAGCTTGTGAAATTGTTAGTAGTTTCAGCATGGAAAGAGATTCTGTTCACTGCATTTCTTGCATTGTTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAGTTTCTTGATGGAAAACAACTCTATGAAAATCAGGGCTATGTTTTGGTTTCTGCATTTTTTGTAGCAAAGATTGTTGAATGTCTTTCACAAAGGCATTGGTTCTTTAAGTTGCAGCAAATCGGAATCCGAATCAGAGCACTGCTTGTGACAATGATCTATAACAAATCATTGACCCTTTCTTGTCAATCAAAAAAGGGACATACTTCAGGGGAGACAATCAACTTGATGACGGTTGATGCCGAAAGAATCGGTGTTTTCAGTTGGTACATGCATGATTTATGGCTAGTAGTATTGCAAGTTTCATTAGCATTGTTGATTTTGTATAAGAATCTTGGCATTGCTTCAATTGCTGCATTTTTTGCAACAGTTTTTGTAATGTTGGCAAATGTTCCTTTAGGATCATTGCAAGAGAAGTTCCAAACAAAGTTGATGGAATCAAAAGATGCAAGAATGAAGGCAACATCAGAGGTTCTTAGGAACATGAGGATCCTCAAATTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAATTCAACTCAGAAAAACTGAACAAATGTGGCTAAAAAAATTTGTTTACACTTCAGCCATGACCACATTTGTGTTTTGGGGTGCTCCAACATTTGTTTCTGTTGTTACTTTTGGCACCTGCATGCTTGTAGGGATTCCACTTGAATCAGGGAAAATCTTATCAGCACTTGCTACATTCAGAATTCTTCAAGAGCCTATATACAATCTTCCAGAAACAATTTCAATGATTGCACAAACTAAGGTTTCTCTTGATAGGATTTCGTCGTTCCTTCGCCTCGAAGACTTGCAATTCGATGTTGTAGAGAAGCTTCCATTAGGTACTTCTGATAAAGCTATTGAAGTAACTAATGGAAACTTCTCTTGGGATTTATCTTCTTCAATTACAACATTGAAGAACATAAATCTAAGTGTTTTTCATGGCATGAAAGTTGCTGTTTGTGGCACTGTTGGATCAGGAAAATCTACATTACTCTCTTGTATATTAGGAGAAGTACCAAAGGTTTCAGGAACTCTAAAAGTGTGTGGTAAGAAAGCATATGTTGCTCAATCACCATGGATACAAAGTGGGAAAATTGAAGATAATATATTGTTTGGTAAGAAGATGGATAGGGAAAAGTATGAGAAGGTTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGACTTTGTCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATTTGAGTGGTGGACAAAAACAAAGGATTCAAATAGCACGTGCTTTATATCAAGATTCTGATATATATCTATTTGATGATCCTTTTAGTGCTGTTGATGCTCATACAGGTTCTCATCTCTTTAAGGAATGTTTGTTAGGCCATTTGAGTTCAAAGACAGTAGTTTATGTTACTCATCAAGTAGAGTTCTTACCTGCTGCTGATCTTATATTGGTCATGAAAAATGGAAAAATTACTCAATGTGGAAAGTATATTGAATTGCTTAACAATGGAGCTGATTTTATGGAACTTGTTGGTGCACATAAAAAGGCTTTGTCCACACTTGATTCAACAAGTACCTTTGAACAAGATATTAGTGTCTCTAATGCTCATGTTGTGGAACAAAAAGAGGCAAGAAAAGATGATCAAATTGGTAATAAAATAGACATCAATGATCATAGTGAGCTAAAAGGCCAGCTAGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTTGATATATTGGAAATACATCACCACAGCATATAGAGGGATTCTTGTTCCATTCATATTGTTGGCTCAGATTCTGTTCCAAACTCTCCAAATTGGAAGCAACTATTGGATGACTTGGGCTACACCAATCTCACAAGATGTGGATCCATCACCTGTTGAAGGATCAACTCTTATACTTGTTTATGTTGCTTTGGCTATTGGAAGTTCTTTCTGCATTCTTGCTAGAGCTATGCTTCTTGTTACTGCCGGTTACAAAACTGCTACACTGTTATTCAATAAGATGCACTTCTGCATTTTCCGCGCACCAATGTCATTCTTTGATTCTACTCCAAGTGGTAGAATTCTCAATAGAGCTTCTACTGACCAAAGTGCTGTTGATACTGACATTCCAAATCAAATTAGTTCAGTTGCCTTCACTCTCATACAGCTTCTTGGAATCATAGCAGTGATGTCTCAAGTTGCATGGCAAGTTTTCTTTGTATTCATACCTGTCATTGCAGCCAGCATATGGTACCAGCAATATTACTTACCAGCAGCGCGAGAACTATCGCGCTTAGTTGGAGTATGCAAAGCGCCAGTGATTCAACACTTTGCTGAAACAATCTCTGGTGCATCAACCATTAGAAGCTTTGATCAGCAGTCTAGATTTCAGGAAACAAATATGAAACTTTCGGACGAATATTCTCGGCCGAAATTCAATGTTACTGGTGCTATGGAATGGTTGTGCTTTCGCTTAGATATGTTGTCTTCAGTCACATTTGCAGTTTCCTTGATATTCTTGGTATCTATTCCAAAAGGAGTCATAAATCCAAGCATTGCTGGTTTAGCTGTTACCTATGGACTAAATTTAAACATGGTGCAAGCTTGGGTTGTATGGAATCTTTGCCGCTTAGAGAACAAGATCATATCGGTCGAAAGGATTATGCAGTATACTTGTGTTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAAATAGACCAGATCCTTCTTGGCCATTATATGGTGAAGTTGACATACAAAACTTGCAGGTTCGTTATGCTTCACACCTTCCACTTGTGTTGCGCGGAATCTCATGCACATTTTATGGAGGATTGAAAACTGGCATTGTTGGAAGAACAGGAAGTGGTAAATCAACTCTCATACAAACTCTATTCCGAATCGTTGAACCAGCTGCTGGGAGAGTTATGATTGATGGCATCAACATATCTTCAGTAGGACTTCATGATTTGAGGTCTAGACTTGGCATTATTCCTCAAGATCCAACCATGTTTGAAGGGACAGTTAGAAACAATTTGGACCCTCTTGAAGAGTACACTGATGAACAAATTTGGGAGGCCTTAGATAAGTGCCAACTTGGAGATGAAGTTAGAAAGAAAGATGGAAAGTTGGACTCTCCAGTTAGCGAAAATGGCGAAAATTGGAGCATGGGACAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTGCTAAAGAAGAGCAAGATATTGGTTCTTGATGAAGCAACTGCATCAGTTGATACTGCTACAGACAATTTGATTCAACAAACTCTTAAGCTGCATTTTGCTGACTCTACAATCATAACCATTGCACATAGAATCACTTCTGTTCTTGACAGCAATATGGTCTTGCTTCTTCATCAAGGAGTTATTGAAGAGTATGAGTCACCTTCAAAATTGCTAGAGGATAGGTGTTCTTCTTTTTCCCAACTTGTGGCTGAATATTCCACTAGGTCCAAGTCAACTTTTGATAAATCTGTTGTTCAATGA 4497 0.3774 MWFVSSLFSSLMHFPTCFLLKPIFLHALSSFFHLLLLAMVLVTLLCKRIITVESKDKKTNNNNKALFQKTLFCSVGFSAFNLFLSLIDYFIWYRTSLSQEKLFTLLDLALKTVSWGVLAISMHNDHIRFPLLLFRIWCAFYLFVSCSSFIVDIIVLILYKKHVPLPPQCIVSDVVATLVGLFFCYVMCYVKNDECEDISTIEEPLLNGDDHASSMEKKETNRGGETVTPYLNAGIFSILTFSWIGSLIALGNKKILDLEDVPQLDSGDSVVEAFPAFKEKVEADCGGTNHITTLKLVKLLVVSAWKEILFTAFLALLNTLASYVGPYLIDAFVQFLDGKQLYENQGYVLVSAFFVAKIVECLSQRHWFFKLQQIGIRIRALLVTMIYNKSLTLSCQSKKGHTSGETINLMTVDAERIGVFSWYMHDLWLVVLQVSLALLILYKNLGIASIAAFFATVFVMLANVPLGSLQEKFQTKLMESKDARMKATSEVLRNMRILKLQGWEMKFLSKIIQLRKTEQMWLKKFVYTSAMTTFVFWGAPTFVSVVTFGTCMLVGIPLESGKILSALATFRILQEPIYNLPETISMIAQTKVSLDRISSFLRLEDLQFDVVEKLPLGTSDKAIEVTNGNFSWDLSSSITTLKNINLSVFHGMKVAVCGTVGSGKSTLLSCILGEVPKVSGTLKVCGKKAYVAQSPWIQSGKIEDNILFGKKMDREKYEKVLEACSLKKDLETLSFGDQTIIGERGINLSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFKECLLGHLSSKTVVYVTHQVEFLPAADLILVMKNGKITQCGKYIELLNNGADFMELVGAHKKALSTLDSTSTFEQDISVSNAHVVEQKEARKDDQIGNKIDINDHSELKGQLVQEEEREKGKVGFLIYWKYITTAYRGILVPFILLAQILFQTLQIGSNYWMTWATPISQDVDPSPVEGSTLILVYVALAIGSSFCILARAMLLVTAGYKTATLLFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPNQISSVAFTLIQLLGIIAVMSQVAWQVFFVFIPVIAASIWYQQYYLPAARELSRLVGVCKAPVIQHFAETISGASTIRSFDQQSRFQETNMKLSDEYSRPKFNVTGAMEWLCFRLDMLSSVTFAVSLIFLVSIPKGVINPSIAGLAVTYGLNLNMVQAWVVWNLCRLENKIISVERIMQYTCVPSEPPLVVEENRPDPSWPLYGEVDIQNLQVRYASHLPLVLRGISCTFYGGLKTGIVGRTGSGKSTLIQTLFRIVEPAAGRVMIDGINISSVGLHDLRSRLGIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKDGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLKLHFADSTIITIAHRITSVLDSNMVLLLHQGVIEEYESPSKLLEDRCSSFSQLVAEYSTRSKSTFDKSVVQ* 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0270 1498 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 99 1494 - -
Ahy17g0270 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 846 IPR003439 GO:0005524
Ahy17g0270 1498 SUPERFAMILY ABC transporter transmembrane region 927 1230 IPR036640 GO:0005524|GO:0016021
Ahy17g0270 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 845 IPR027417 -
Ahy17g0270 1498 Gene3D ABC transporter type 1, transmembrane domain 289 605 IPR036640 GO:0005524|GO:0016021
Ahy17g0270 1498 Gene3D ABC transporter type 1, transmembrane domain 891 1229 IPR036640 GO:0005524|GO:0016021
Ahy17g0270 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 930 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0270 1498 CDD ABCC_MRP_domain1 623 823 - -
Ahy17g0270 1498 ProSitePatterns ABC transporters family signature. 748 762 IPR017871 GO:0005524
Ahy17g0270 1498 Pfam ABC transporter 1265 1413 IPR003439 GO:0005524
Ahy17g0270 1498 Pfam ABC transporter transmembrane region 309 576 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0270 1498 Pfam ABC transporter transmembrane region 932 1173 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0270 1498 CDD ABCC_MRP_domain2 1246 1466 - -
Ahy17g0270 1498 Pfam ABC transporter 641 775 IPR003439 GO:0005524
Ahy17g0270 1498 Gene3D - 610 867 IPR027417 -
Ahy17g0270 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1482 IPR003439 GO:0005524
Ahy17g0270 1498 Gene3D - 1231 1484 IPR027417 -
Ahy17g0270 1498 SUPERFAMILY ABC transporter transmembrane region 303 605 IPR036640 GO:0005524|GO:0016021
Ahy17g0270 1498 CDD ABC_6TM_ABCC_D2 928 1223 IPR044726 GO:0140359
Ahy17g0270 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1239 1474 IPR027417 -
Ahy17g0270 1498 SMART AAA_5 1274 1466 IPR003593 -
Ahy17g0270 1498 SMART AAA_5 650 823 IPR003593 -
Ahy17g0270 1498 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Ahy17g0270 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0270 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 99 1494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0270 Ahy-Chr17 2570053 2576059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0270 623 859 Calmodulin-binding Proteins AT2G36910 30.739 1.92e-26 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0270 - K05666 gmx:100811245 2293.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0270 17 2570053 2576059 Ahy17g0270 17 2570053 2576059 ECH