Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0268 ATGTCTTATGTTTCCTCGTACCTTTCCCTCATGCACTCTCACATAAGCTTTCTTCTCCAACCCATTTTTCTTCATGCATTCTCAGCCATCATCCACCTCCTACTGTTGGCTATAGTTTTGGTTTCATGGCTTTGGAAGAAGATCATCACTGTTGGAGAAACTGGAGATGACTCCAATAACAAGCATCAGAAGCCTTTGAATAATGCTGTGTTAAGAAAGACTACTTTGTTTTGTTCATTAGGTGCTTCTGCTTTCAATCTTATCCTCTGCCTCTATAGTTACTACTTCTTAGGAGAAAAAGAAAAAGAAGAAGAAAAGCTCGTGACCCATTTGGATTTAGGTCTAAAAACTCTTGCTTGGGGTGTTATTAGTGTTTGCTTGCACAAAAGCTTGCTCTTATTTAGTTCAGGTGATGGTAGAAGAAGGTTCTCTTTCATGTTCAGAGCATGGTGTGTTTTCTACTTTTTTGTTTCATGTTACTCCTTTGTAGTGGACTTTGTTCTTCATTTTTATGAAAAGCACGTGACTTTACCAGCTCAGGACATAGTTTCTGATGTGATTTCAGCTTCTGTGGGTTTATTCTTTTGCTATGTGGTGTGTTTTGTGAAGAAAATTGATGAGTTTGAAGAGGATCATATCATTGATGATCTTCAAGATCCTTTACTATTGGATAATGGTAATGCAACTGTTTGTAGTAATGCCTCTGGGGCTGACATTGTTACCCCTTTCTCAAATGCTGGGATTTTCAGCATTCTAACATTCTCTTGGGTGGGCCCTCTTGTTTCTCTTGGCAATAAGAAAACCTTGGACCTTGAGGATGTTCCACTACTTGATAAAAGAGATAGTGTAGTTGAAATTTTTTCAACTTTCAGAGAAAAAGTTGAAGAAGATTGTGGTGCAATTAATCACATAACCACTCTTAAACTGGTGAAGTTGTTAGTACTATCAGCATGGAAAGAGATTCTCTTCACTGCATTTCTTGCATTGTTGAATGCTTTGGCTTCTTATGTTGGTCCTTATCTTATTGATGCTTTTGTTCAATACCTTGATGGTCAAAGGGTTTATGAGAATCAAGGCTATGTTCTTGTTTCTGCATTTTTCTTATCAAACCTTGTTCAGTCCCTATCACAAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGGATTAGAATCCAAGCACTTCTTGTGACTATGATCTATAACAAAGCCTTGACCCTTTCATGTCAATCAAAGCAGGGTCATACTTCTGGTGAAATGATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGAACTTTCACTTGGTATATGCATGATTTGTGGAGGGTAGCTTTGCAAATTGTCTTAGCCTTGTTGATTTTGTATAGAAGTGTTGGTCTTGCTTCAATTGCCGCATTTGTGGCCACTGTCATTGTCATGTTGGTAAATGTTCCTGTGGGAAAAATGCAACAGAAGTTTCAGAAAAACTTGATGGATTCAAAGGACGCAAGAATGAAGGCAACATCTGAGATTCTAAGGAACATGAAGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAGATAAATGAGCTTAGGAAAACTGAGGAAGGGTGGTTAAAGAAATCTGTATACAATTCAGCTATCAGTGCTTTTGTGTTCTGGATTGCTCCGTCTTTTGTATCTGTTGTTACTTTTGGTACATGTATGGTTATGGGGATTCCACTTGAATCAGGGAAGATCTTATCAGCACTTGCTACATTTAGAATTCTTCAAGGTGCCATATATAATCTTCCAGAAACAATATCAGCTATAGTACAAACTAAGGTTTCTCTTGATAGGATTTCTTCTTTCCTTCGTCTCGGTGACTTGCAATCTGATGTTGTAGAGAAGCTTCCTTTAGGTACTTCTGATAAAGCAATCGAAGTAACTAATGGAAACTTCTCTTGGGATCCATCTTCTCCAAATACAACATTGAAGAACATAAATTTTGAAGTTTTCCATGGCATGAGGGTTGCTGTTTGTGGGACAGTTGGATCAGGAAAATCTACATTGCTATCTTGTATGTTGGGAGAGGTACCGAAGGTTTCGGGGACTCTAAAAGTGTGTGGAACAAAGGCCTATGTTGCTCAATCACCATGGATACAAAGTGGAAAGATAGAGGATAATATACTGTTTGGTAAAGAGATGGATAAGGAAAAGTATGAAAAGGTTCTTGAAGCTTGTTCCTTGAAGAAGGATCTTGAGATTTTATCATTTGGGGACCAAACAATTATAGGTGAACGTGGGATAAATATGAGTGGTGGACAAAAACAAAGGATTCAAATAGCACGTGCTTTATATCAAGATTCTGATATATATCTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCATCTCTTTAAGGAATGTTTGCTAGGCCTTTTAAGATCAAAGACAGTGATTTATGTTACTCATCAAGTTGAGTTCTTACCGGCTGCTGATCTTATATTGGTAATGAAAGATGGGAAGATTACTCAATGTGGAAAGTATGCTGATCTGCTTAACAATGGAACTGATTTTATGGAACTTGTTGGTGCACATAAAAAAGCTTTGTCTACACTTGATTCAATAGATGAAAGAATAATATCCAATGAAATATGTACCTTGGAACAAGATTCAGATTTTCCTATTTCTCAGGGTGGAGAAGAAGAAGAGGAAAAGAAAGATGAGCAAAATGGTAAAACTGGTAAGAAAGGTGATGAGGCAAAAGGCCAACTTGTTCAAGAAGAAGAAAGAGAGAGTGGTAGAGTTGGATTTTCAGTGTATTGGCAATATATCACTATGGCATATGGAGGTGCTCTTGTTCCTTTCATTCTGTTGGCTCATACTCTCTTCCAAGTTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACACCAATCTCACAAGATGTCGAGCCACCTGTTTCTGGAACAACTCTTATAGCAGTCTATATTGCTTTGGCTGTTGGAAGTTCTTTCTGCATTCTTGCAAGGACTATACTATTTGCCACTGCTCTATGTAAGACAGCTACCATAATCTTCAATAAGATGCACTTCTGCATTTTTCGCGCTCCAATGGCATTCTTTGATTCCACTCCAAGCGGCCGAATTCTTAATAGAGCTTCTACTGATCAAAGTTCAGTAGACACTGAGGTTCCTTATCAGTTTGCTTCATTTGTTTTTCCACTGATCCAACTTGTGGGAATTATAGCAGTGATGTCTCAAGCTGCATGGCAAGTTTTTATTGTCTTTATACCTGTGATTGCAATCAGCATTTGGTATCAGCAATATTATTTGCCAGCAGCTCGAGAACTATCGCGTTTAGTTGGAGTATGCAAAGCCCCAATCATTCAGAACTTTTCTGAAACAATTTCTGGTACACCAACCATCAGAAGCTTTGATCAGCAGTCCAGATTTCAGGAAAAGAATTTGAAACTGATCGACAGATATTCGCGACCAGAGTTCAATAGTGCTGCTGCATCAGAATGGTTGTGCTTCCGTTTAGATATATTGTCTTCTATCATCTTTGCATTTTCCTTGATATTCTTGATATCCATTCCAGAAGGATTCATAGATCCAGGCCTTGCTGGTTTATCTGTTACCTATGGACTAAATTTGACCACAATAAATGCTTGGGTGATATGGAGTCTTTGCAGTTTGGAGAACAATATTATATCAGTGGAAAGAATACTTCAGTATACTTCCATTCCTAGTGAGCCTCCCCTTGTTGTCGAAGAAAATCGACCGGATCCTTCTTGGCCTTCACACGGCGAGGTTAATATACATGAATTGCAGGTTCGTTATGCTCCACACCTTCCACTTGTGTTGCATGGCCTCACATGCACATTTCGCGGAGGATGGAGAACTGGAATTGTTGGTAGAACAGGAAGTGGCAAAACAACTCTCATACAAACTCTTTTCCGAATTGTTGAACCAACTGCTGGAGAAGTTGTGATTGATGGCATCAACATCTCTTCAATAGGACTTCATGATTTGAGGTCTAGATTAAGCATTATTCCTCAGGATCCAACCATGTTTGAAGGGACTGTGAGAAACAATCTGGATCCACTAGAGGAGTACACAGATGAACAAATTTGGGAGGCCCTTGATAAGTGTCAACTTGGTGATGAAGTTAGAAAGAAAGAAGGAAAGCTGGACTCTCCAGTTAGTGAGAATGGTGAAAATTGGAGCATGGGTCAGAGGCAATTGGTGTGCCTAGGTAGGGTGCTTCTGAAGAAGAGCAAGGTATTGGTACTCGACGAAGCGACTGCATCAGTTGATACTGCTACGGACAATTTAATTCAACAAACTCTTAGGTTGCATTTCACTGAGTCCACAGTCATAACCATTGCGCATAGAATCACTTCTGTTCTTGACAGCGATATGGTCTTGCTTCTTCATCAAGGACTAATTGAGGAGTATGATTCACCTTCAAAATTGCTAGAGGATAAGTCATCATCTTTTGCTCAACTTGTTGCAGAGTATACAATGAGATCTAAGTCCACTCTTCAGAAATTTGCTTATCAATGA 4554 0.3895 MSYVSSYLSLMHSHISFLLQPIFLHAFSAIIHLLLLAIVLVSWLWKKIITVGETGDDSNNKHQKPLNNAVLRKTTLFCSLGASAFNLILCLYSYYFLGEKEKEEEKLVTHLDLGLKTLAWGVISVCLHKSLLLFSSGDGRRRFSFMFRAWCVFYFFVSCYSFVVDFVLHFYEKHVTLPAQDIVSDVISASVGLFFCYVVCFVKKIDEFEEDHIIDDLQDPLLLDNGNATVCSNASGADIVTPFSNAGIFSILTFSWVGPLVSLGNKKTLDLEDVPLLDKRDSVVEIFSTFREKVEEDCGAINHITTLKLVKLLVLSAWKEILFTAFLALLNALASYVGPYLIDAFVQYLDGQRVYENQGYVLVSAFFLSNLVQSLSQRHWFFRLQQVGIRIQALLVTMIYNKALTLSCQSKQGHTSGEMINFMTVDAERVGTFTWYMHDLWRVALQIVLALLILYRSVGLASIAAFVATVIVMLVNVPVGKMQQKFQKNLMDSKDARMKATSEILRNMKILKLQGWEMKFLSKINELRKTEEGWLKKSVYNSAISAFVFWIAPSFVSVVTFGTCMVMGIPLESGKILSALATFRILQGAIYNLPETISAIVQTKVSLDRISSFLRLGDLQSDVVEKLPLGTSDKAIEVTNGNFSWDPSSPNTTLKNINFEVFHGMRVAVCGTVGSGKSTLLSCMLGEVPKVSGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDKEKYEKVLEACSLKKDLEILSFGDQTIIGERGINMSGGQKQRIQIARALYQDSDIYLFDDPFSAVDAHTGSHLFKECLLGLLRSKTVIYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNNGTDFMELVGAHKKALSTLDSIDERIISNEICTLEQDSDFPISQGGEEEEEKKDEQNGKTGKKGDEAKGQLVQEEERESGRVGFSVYWQYITMAYGGALVPFILLAHTLFQVLQIGSNYWMAWATPISQDVEPPVSGTTLIAVYIALAVGSSFCILARTILFATALCKTATIIFNKMHFCIFRAPMAFFDSTPSGRILNRASTDQSSVDTEVPYQFASFVFPLIQLVGIIAVMSQAAWQVFIVFIPVIAISIWYQQYYLPAARELSRLVGVCKAPIIQNFSETISGTPTIRSFDQQSRFQEKNLKLIDRYSRPEFNSAAASEWLCFRLDILSSIIFAFSLIFLISIPEGFIDPGLAGLSVTYGLNLTTINAWVIWSLCSLENNIISVERILQYTSIPSEPPLVVEENRPDPSWPSHGEVNIHELQVRYAPHLPLVLHGLTCTFRGGWRTGIVGRTGSGKTTLIQTLFRIVEPTAGEVVIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSPVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFTESTVITIAHRITSVLDSDMVLLLHQGLIEEYDSPSKLLEDKSSSFAQLVAEYTMRSKSTLQKFAYQ* 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0268 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 859 IPR003439 GO:0005524
Ahy17g0268 1517 SUPERFAMILY ABC transporter transmembrane region 949 1249 IPR036640 GO:0005524|GO:0016021
Ahy17g0268 1517 Gene3D - 621 878 IPR027417 -
Ahy17g0268 1517 MobiDBLite consensus disorder prediction 886 923 - -
Ahy17g0268 1517 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 121 1513 - -
Ahy17g0268 1517 CDD ABCC_MRP_domain2 1265 1485 - -
Ahy17g0268 1517 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Ahy17g0268 1517 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 121 1513 - -
Ahy17g0268 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
Ahy17g0268 1517 SMART AAA_5 1293 1478 IPR003593 -
Ahy17g0268 1517 SMART AAA_5 663 836 IPR003593 -
Ahy17g0268 1517 Gene3D - 1250 1503 IPR027417 -
Ahy17g0268 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 950 1230 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0268 1517 CDD ABCC_MRP_domain1 636 836 - -
Ahy17g0268 1517 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Ahy17g0268 1517 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0268 1517 MobiDBLite consensus disorder prediction 893 923 - -
Ahy17g0268 1517 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1269 1501 IPR003439 GO:0005524
Ahy17g0268 1517 Pfam ABC transporter transmembrane region 322 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0268 1517 Pfam ABC transporter transmembrane region 956 1192 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0268 1517 Pfam ABC transporter 1284 1432 IPR003439 GO:0005524
Ahy17g0268 1517 Gene3D ABC transporter type 1, transmembrane domain 302 616 IPR036640 GO:0005524|GO:0016021
Ahy17g0268 1517 Gene3D ABC transporter type 1, transmembrane domain 911 1248 IPR036640 GO:0005524|GO:0016021
Ahy17g0268 1517 CDD ABC_6TM_ABCC_D2 948 1242 IPR044726 GO:0140359
Ahy17g0268 1517 SUPERFAMILY ABC transporter transmembrane region 315 614 IPR036640 GO:0005524|GO:0016021
Ahy17g0268 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1258 1497 IPR027417 -
Ahy17g0268 1517 CDD ABC_6TM_ABCC_D1 335 610 IPR044746 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0268 Ahy-Chr17 2539173 2544916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0268 636 877 Calmodulin-binding Proteins AT2G36910 29.572 1.12e-24 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0268 - K05666 gmx:100777836 2228.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0268 17 2539173 2544916 Ahy7g0162 7 1218238 1223932 hybridization
Ahy17g0268 17 2539173 2544916 Ahy7g0167 7 1264725 1270883 hybridization