Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0243 ATGATCATGGGGTTGTTTCCTAGAGTTATTATGGTCTTGTTTGTTGTTATGGTTTTGAGTTTGAAGGTTCAGGTGAATTTAGCAGCAGCAGCAGAAGAAGAAGAAGGTTATTTCAATGGGAATGTTGATGATGATGATGATGATAATGTGAAGAGCTACATTAGTTGGGAGGATTTGGAAGTGGGGGAGGAGAGTTTGGAATTGAAATCAAAGAAAGAGGTTAGAGTTATTGTGGTTGATCAACATGGTAAGGGACATTCAAAAACTGTTCAAGGTGCTGTGAATATGGTTCCAGATCACAACAAAGAAAGGGTCAAAATTTACATTTATCCAGGAACTTATAGGGAAAAAGTGCTTGTGCCAAAGAGCAAACCTTATATTTCATTTATAGGTAAAAGAAATGAAACATCAAGTGCTGTGATTACTTGGAACAGCAAATCATCTGATCAAGGCCCTAATGGCCAAACATTGGGAACCTATGGTTCAGCAACTGTTGGAATTGACTCTGATTATTTCTGTGCCTCTCAGGTCACTTTTGAGAATTCAGTGGTTGCAATGCCTGGTGGAAATGGAATGCAAGCAGTGGCACTAAGGGTAAACAGTAATAGAGCCATGTTCTATAAAGTTAAGATCAAAGGAACACAGGACACTCTCTTAGACAACACAGGAACACATTACTTCTATAAATGTTACATCCAAGGAAAGATTGATTTCATCTTTGGCAGTGCTAAATCACTCTATGAGAAATGTAGGCTTGAGTCAATAGCTGAGAGCTTTGGAGCAATTGCAGCACATCATAGGGATTCAGAAAAGCAAGACACAGGATTTTCATTTGTAGGATGCAAGATTAGAGGGAGTGGGAGTGTGTACCTTGGAAGAGCATGGGGTAACTACTCAAGAATTATATACTCCAATTGTTACATGGATGATATCATCAATCCTCAAGGCTGGTCAGAATGGAACCATCCAGAAAGAAAAAGGACTGCAGTGTTTGGTGAATATAAGAACATGGGAAGAGGAGCAGATAGAAGACAGAGAGTGGCATGGTCAAAATCATTCAACTATCAGGAAGCAAGGCCTTTCCTTGGCAAGAGCTTCATCAATGGAGATCAATGGCTCAGACTCTAG 1128 0.3972 MIMGLFPRVIMVLFVVMVLSLKVQVNLAAAAEEEEGYFNGNVDDDDDDNVKSYISWEDLEVGEESLELKSKKEVRVIVVDQHGKGHSKTVQGAVNMVPDHNKERVKIYIYPGTYREKVLVPKSKPYISFIGKRNETSSAVITWNSKSSDQGPNGQTLGTYGSATVGIDSDYFCASQVTFENSVVAMPGGNGMQAVALRVNSNRAMFYKVKIKGTQDTLLDNTGTHYFYKCYIQGKIDFIFGSAKSLYEKCRLESIAESFGAIAAHHRDSEKQDTGFSFVGCKIRGSGSVYLGRAWGNYSRIIYSNCYMDDIINPQGWSEWNHPERKRTAVFGEYKNMGRGADRRQRVAWSKSFNYQEARPFLGKSFINGDQWLRL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0243 375 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 51 375 - -
Ahy17g0243 375 Gene3D - 71 375 IPR012334 -
Ahy17g0243 375 PANTHER PECTINESTERASE QRT1 51 375 - -
Ahy17g0243 375 SUPERFAMILY Pectin lyase-like 76 373 IPR011050 -
Ahy17g0243 375 Pfam Pectinesterase 77 370 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0243 Ahy-Chr17 2303812 2305956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0243 2 327 Carbohydrate Esterase AT5G55590 53.179 2.82e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0243 K01051 - gmx:100813382 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0243 17 2303812 2305956 Ahy17g0243 17 2303812 2305956 ECH
Ahy17g0243 17 2303812 2305956 Ahy7g0138 7 986809 988917 hybridization