Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0239 ATGGCGAACAGGTCGAACACAGAAGCAACAGAGCCCTTGCTATCAGGATCAGAGGATCTTGAAGCTCAAAAGTTCAGAAGGCAGTTAAAGAAGAGAAGGTTCCGCCGTGCTAGAAGTGCACCTTGCAACGATGTTGATCCCCAGGACACCAATGGCAATATACCAATTCCAAGATCTGATTCAATATTTGGGAATATACATCCAAGCTTTAGAAAAGTTGCTATATACCTTGTAGTGTATATAGGAGTAGGTGCTATTGTATTCTACCTTGTTGGGAACCAGATCAAGGGGCTGAAAACAGATGGGGTTCTTGATGCTGTATACTTCACAATCGTAACAATGACCACAGTTGGTTATGGAGATATTGTTCCGAATAGCAACCTTACAAAGCTACTTGCATGCGCTTTTGTTTTCACCGGAATGGCATTGGTTGGACTAATCCTAGGCAAAGCAGCAGATTACTTGGTTGAGAAGCAAGAATTCTTGCTAGTTAAAGCTTTGCACATGCACCAAAACGTTGGTCAAAGAGAAATTCTAAAGGAGGTTGAGGTGAACAAAACAAGATACAAATTCCTTTTGGCCTTTTTCCTTCTCTTGATTATGATCATAGCGGGGACAGTTTTCTTGATCATGGTTGAGAAATTGGAATTCGTCGATGCGTTTTACTGCGTTTGTTCTACTCTTACAACCCTGGGATATGGTGATAAGAGTTTCTCAACTGAAGCAGGAAGAATATTTGCTGTGTTTTGGATATTGGCAGGTACAATTTCTTTGGCTCAGGTGTTCCTTTACATTGCTGAGCTTAACACTGAAAGCCGACAAAAGAAAATTGTGAAGTGGGTTCTTTCGAAGAAGATGACCAATTTGGACTTGGAGGCAGCAGATATTGATGATGACGGCACTGTTGGGGCTGCTGAATTCGTTGTTTATAAACTCAAAGAGATGGGGAAGATTAGTCAAGAAGATATATCACTTTTGATGCAGGAGTTTGAAGAACTTGATGTTGATCAAAACGGTACCCTTTCAATTTCTGATTTAGCACTTGCTCAGTCATCCTAG 1059 0.4098 MANRSNTEATEPLLSGSEDLEAQKFRRQLKKRRFRRARSAPCNDVDPQDTNGNIPIPRSDSIFGNIHPSFRKVAIYLVVYIGVGAIVFYLVGNQIKGLKTDGVLDAVYFTIVTMTTVGYGDIVPNSNLTKLLACAFVFTGMALVGLILGKAADYLVEKQEFLLVKALHMHQNVGQREILKEVEVNKTRYKFLLAFFLLLIMIIAGTVFLIMVEKLEFVDAFYCVCSTLTTLGYGDKSFSTEAGRIFAVFWILAGTISLAQVFLYIAELNTESRQKKIVKWVLSKKMTNLDLEAADIDDDGTVGAAEFVVYKLKEMGKISQEDISLLMQEFEELDVDQNGTLSISDLALAQSS* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0239 352 Gene3D - 195 256 - -
Ahy17g0239 352 SUPERFAMILY Voltage-gated potassium channels 184 284 - -
Ahy17g0239 352 Gene3D - 257 351 - -
Ahy17g0239 352 Gene3D - 67 161 - -
Ahy17g0239 352 ProSitePatterns EF-hand calcium-binding domain. 334 346 IPR018247 -
Ahy17g0239 352 Pfam Ion channel 197 268 IPR013099 -
Ahy17g0239 352 Pfam Ion channel 75 156 IPR013099 -
Ahy17g0239 352 PRINTS Two pore domain K+ channel signature 226 254 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0239 352 PRINTS Two pore domain K+ channel signature 300 309 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0239 352 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 20 344 - -
Ahy17g0239 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 20 344 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0239 352 MobiDBLite consensus disorder prediction 1 53 - -
Ahy17g0239 352 SUPERFAMILY Voltage-gated potassium channels 65 170 - -
Ahy17g0239 352 ProSitePatterns EF-hand calcium-binding domain. 295 307 IPR018247 -
Ahy17g0239 352 SUPERFAMILY EF-hand 254 348 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0239 Ahy-Chr17 2274276 2277162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0239 55 352 Ion Channels AT5G55630 61.074 8.53e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0239 K05389 - gmx:100777388 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0239 17 2274276 2277162 Ahy17g0239 17 2274276 2277162 ECH