Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0230 ATGAGACAAATTGTTCCAAAGCATGCAAAGATTTGTGATGACACCAAAGAAATTGTTCGTAGCTGCGTTTGTGAGTTCATAGGAATAGTTACCTACGAAGCAAATGGGCATTGTGACACCGAGCAACGTAGGACTCTTGCTGCTGAGGACATCATATGGGCCATGTCGAGCCTTGGTTTCGACAACTACGCCGAGCTTCTCAAGGCTCATCTTAGCCATGTGCGCTATATTGGCGCTGAGGCACACTACACTGATGCTCCTCAACGCCCTGACGAGAATGTTGCTCCACCACCAACCCCTACACGTGGGGGTGTTGGTGGACCAACATCCTTTGTGTGTAGGAGTGAGTATGACCCAAGGGAGACTGGGAAGGTTTGTGGTGGGTTCAGGTTGGGTGGTGGGGCTTGGTCAACTAGTGGTGACAATGTTGGAGGGAGTGAGTTTGATCCTCTTGCTTACCTCAATCGTGACAAGTTCCTTTGA 483 0.4969 MRQIVPKHAKICDDTKEIVRSCVCEFIGIVTYEANGHCDTEQRRTLAAEDIIWAMSSLGFDNYAELLKAHLSHVRYIGAEAHYTDAPQRPDENVAPPPTPTRGGVGGPTSFVCRSEYDPRETGKVCGGFRLGGGAWSTSGDNVGGSEFDPLAYLNRDKFL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0230 160 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 1 86 - -
Ahy17g0230 160 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Ahy17g0230 160 Gene3D Histone, subunit A 1 93 IPR009072 GO:0046982
Ahy17g0230 160 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 86 IPR027113 GO:0001228|GO:0006355|GO:0016602
Ahy17g0230 160 SUPERFAMILY Histone-fold 1 77 IPR009072 GO:0046982
Ahy17g0230 160 MobiDBLite consensus disorder prediction 85 110 - -
Ahy17g0230 160 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
Ahy17g0230 160 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Ahy17g0230 160 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0230 Ahy-Chr17 2205698 2206180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0230 1 80 CCAAT-HAP3 Transcription Factor Family AT5G47670 52.500 7.56e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Ahy17g0230 CBFD_NFYB_HMF 7.20E-11 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0230 K08065 - qsu:111993144 102.064