Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0201 ATGATCATGGAAAATGGTAGGGAGGATCATGAGATTGAGGACATGTCAATGTCAATGTCACCACCTTCTGTTGGTTCCATGCAAATAGCTGGAAGCAATGGCTTTGGCCACAGCATAGAGTTCATGTCTCAAGCATATCTTCCCAATAGGTACTCAGAAGTTGTCCTTAAAATTGTGGATTCAAGCATTAACCAAGATCCACCACTCCCCATATATCTGAAGTTTGAGGATGTAGAGTTCAAAGTGAAAAATAGCCAAACAGATTCCAACAACCCTTTAAAGAAAATGGTGACAAAGGTGGCCACACAACAAGTGGAACAAGAAAAATACAAGAAAATCCTTAAGGGTATCACAGGGAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGCAGTGGAAAAACAACTTTGTTGAAAGTAATTGGAGGAAGATTACTTGAGAATGTAAAGGGAAACATTACTTATAATGATGTTAGATTTAATCCTGCTATAAAGAGAAGGATTGGATTTGTTACACAAGAGGATGTGCTTTTCCCACAACTTACAATAGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAACAAAAATATGCAAAAGTGGAAAACACTATCAAGGAGTTAGGACTTGAAAGATGTCGCCACACGAAAATTGGTGGAGGATTTCTAAAAGGCATATCAGGAGGAGAAAGGAAGAGAACTAGCATAGGGTATGAAATTCTTGTTGATCCTTCATTGCTGTTACTTGATGAACCAACTTCAGGTCTTGATTCAACCTCAGCTAACAAACTTCTCCTCACTCTTCAAGGACTTGCCAAGGGTGGGAGGACCATAATAACTACAATTCACCAACCATCAAGCAGAATCTTTCATATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTGTTTATTATGGAAAGGCTAGAGACTCAATGGAATACTTTTCTTCATTGAGATTCGCCCCTGATATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGTCAAGTGAATGACATAAGTGTTCCTCAGGAAATTTTGGGAGATCAAGAATCTTCTGAGCCTTCAAAAGCTGTTATTAAGTATCTAAAACTCAAGTACAAAGAAATTCTGGACCCAAAAGAAAAGCTAGAGAACCATGGAGTGGTAAACACACCAAAACATCTTCAGCTAGCAATTCAGGTTAAAAAGGAGTGGACATTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCACAGCAAGATGCAAGGACTATTTTGATAAATTCAGACTAATTCAAGCCCTTGGAATTGCAATTATTTTGGGGCTACTTTGGTGGAAATCCTCAACCAACACAGAGGCTCAACTAAGAGATCAGATTGGTTTAATGTTCTATATCTGCATATTTTGGACATCTTCATGTATCTTTGGAGCAGTATATGTTTTTCCATTTGAAAAAGCCTACATAGTGAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTATACTATGCATGCAGCACTCTGAGTGACATGGTAGCACATGTTTTCTATCCTACTTTCTTCATGATTATCTTGTACTTCATGGCCGGATTCAAGAGGACGGTCGCATGCTTCTTCTTAACATTGTTTGCAGTGCTGTTAATAGCCATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTAATACTAATGTTATTCCTTCTCACTGGTGGATACTATGTCCAGCACATACCAAAGTTCATGCAGTGGATGAAGTACCTTTCATTCATGTACTATGGATTCAGACTTCTTCTAAAAGTGCAGTATTCAGGAGACCAACTCTATGAATGTGAGAGCATAGGAGGGTGTAGGACCCTTCAGAGTTCACCTTCATTTGACACTGTTAATTTGAAAGGTGGCTTACAAGAAGTTTGGGTTCTCATAGCCATGGCATTATGCTTCCGTTTTCTTGCTTACTTCTGCCTCCGCAGAAACATTGATGTATGCAATTATTAG 2076 0.3911 MIMENGREDHEIEDMSMSMSPPSVGSMQIAGSNGFGHSIEFMSQAYLPNRYSEVVLKIVDSSINQDPPLPIYLKFEDVEFKVKNSQTDSNNPLKKMVTKVATQQVEQEKYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLLENVKGNITYNDVRFNPAIKRRIGFVTQEDVLFPQLTIEETLIFSAFLRLPTNMSKQQKYAKVENTIKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDSMEYFSSLRFAPDIPMNPAEFLLDLATGQVNDISVPQEILGDQESSEPSKAVIKYLKLKYKEILDPKEKLENHGVVNTPKHLQLAIQVKKEWTLSWLDQFIILYKRTFTARCKDYFDKFRLIQALGIAIILGLLWWKSSTNTEAQLRDQIGLMFYICIFWTSSCIFGAVYVFPFEKAYIVKERKADMYRLSVYYACSTLSDMVAHVFYPTFFMIILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWMKYLSFMYYGFRLLLKVQYSGDQLYECESIGGCRTLQSSPSFDTVNLKGGLQEVWVLIAMALCFRFLAYFCLRRNIDVCNY* 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0201 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 10 686 - -
Ahy17g0201 691 Pfam ABC-2 type transporter 421 629 IPR013525 GO:0016020|GO:0140359
Ahy17g0201 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 336 IPR003439 GO:0005524
Ahy17g0201 691 SMART AAA_5 123 314 IPR003593 -
Ahy17g0201 691 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 686 - -
Ahy17g0201 691 Pfam ABC transporter 114 264 IPR003439 GO:0005524
Ahy17g0201 691 Pfam ABC-2 type transporter 293 354 IPR043926 GO:0140359
Ahy17g0201 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 328 IPR027417 -
Ahy17g0201 691 Gene3D - 98 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0201 Ahy-Chr17 1969627 1973113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0201 112 297 Calmodulin-binding Proteins AT2G36910 30.890 2.44e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0201 K05681 - gmx:100815259 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0201 17 1969627 1973113 Ahy17g0201 17 1969627 1973113 ECH
Ahy17g0201 17 1969627 1973113 Ahy7g0098 7 628420 632549 hybridization