Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0190 ATGGGGTCTAACTCTGAGGTTCACTTCTCTGGATTTCACATGGATTGCCTAGAGCAAAGAAAGGCCAGCATGGAGCAACCAACAACTTCAGAAGATGATTTGTATAAACAACCTTTCATTATAGGTGTTGCTGGTGGGGCAGCATCTGGCAAGACTGCCGTTTGTGATATGATTATTCAGCAGCTTCATGATCAACGAGTTGTACTTGTTAATCAGGATTCATTTTACCATAATTTGACTGAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACCGAGCAGTTGCTAAGTGTCATGGACAAGTTAAAGCGTGGTCAAGCAGTAAATATTCCAAAGTATGACTTTAAGGGTTACAAGAGTGGTGTGTCTCCGGCGAGAAGGGTAAACCCTGCAGATGTTATAATTTTGGAAGGGATCCTTATTTTCCATGATCCACGTGTTCGGGCATTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGGCTCGCAAGAAGAATTAGGCGTGATACTGCCGAGAAGGCTCGTGATATTGCAACAGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTCGATGACTTTATCCTTCCAACAAAGAAGTATGCTGATATAATCATACCCCGAGGAGGAGATAATCATGTGGCCATCGATTTGATTGTACAGCATATTCGAACAAAACTTGGTCAGCATGATCTGTGTAAAATATATCCTAATTTATACGTCATTCAGTCAACTTTTCAGATGCGGGGTATGCATACCCTCGTACGTGATGCCAAGACAACAAAGCATGATTTTGTATTCTATTCTGACCGTTTGATCCGTTTGGTTGTAGAACACGGCCTAGGGCATCTGCCATTTACAGAAAAACAAGTAATCACTCCTACTGGGTCTGTATACAGTGGTGTGGATTTTTGTAAGAGGTTGTGCGGCGTCTCCATCATCAGGAGTGGGGAGAGTATGGAGAATGCTTTACGCGCATGCTGCAAAGGTATCAAGATTGGGAAGATTCTTATTCATAGAGAAGGAGACAACGGTCAACAGCTAATATATGAAAAGTTGCCGAATGATATCTCAGATAGGCATGTGTTACTCTTGGATCCTATCTTGGGCACAGGTAATTCAGCTGTTCAAGCGATTTCTTTACTATTAAGAAAGGGCGTACCAGAGTCCAATATTATATTTCTCAATCTCATATCAGCACCTCAAGGTGTTCATGTGGTCTGCAAAAGCTTTCCAAGAATAAAAATCGTGACGTCTGAGATTGACATTGGTTTGAATGAAGATTTCCGTGTTATACCTGGCATGGGGGAGTTTGGGGATAGGTATTTTGGAACAGATGATGATGACATGCAAGTTGTGGCCCCTTCTTAA 1407 0.4151 MGSNSEVHFSGFHMDCLEQRKASMEQPTTSEDDLYKQPFIIGVAGGAASGKTAVCDMIIQQLHDQRVVLVNQDSFYHNLTEEELTRVQDYNFDHPEAFDTEQLLSVMDKLKRGQAVNIPKYDFKGYKSGVSPARRVNPADVIILEGILIFHDPRVRALMNMKIFVDTDADVRLARRIRRDTAEKARDIATVLDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQMRGMHTLVRDAKTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVQAISLLLRKGVPESNIIFLNLISAPQGVHVVCKSFPRIKIVTSEIDIGLNEDFRVIPGMGEFGDRYFGTDDDDMQVVAPS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0190 468 Gene3D - 242 457 IPR029057 -
Ahy17g0190 468 PANTHER URIDINE KINASE 9 459 - -
Ahy17g0190 468 Gene3D - 35 241 IPR027417 -
Ahy17g0190 468 SUPERFAMILY PRTase-like 241 458 IPR029057 -
Ahy17g0190 468 CDD UMPK 40 238 IPR000764 -
Ahy17g0190 468 Pfam Uracil phosphoribosyltransferase 256 457 - -
Ahy17g0190 468 Pfam Phosphoribulokinase / Uridine kinase family 40 226 IPR006083 GO:0005524|GO:0016301
Ahy17g0190 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 231 IPR027417 -
Ahy17g0190 468 TIGRFAM udk: uridine kinase 37 238 IPR000764 -
Ahy17g0190 468 CDD PRTases_typeI 315 430 IPR000836 -
Ahy17g0190 468 PRINTS Uridine kinase signature 206 219 - -
Ahy17g0190 468 PRINTS Uridine kinase signature 113 128 - -
Ahy17g0190 468 PRINTS Uridine kinase signature 170 180 - -
Ahy17g0190 468 PRINTS Uridine kinase signature 68 79 - -
Ahy17g0190 468 PRINTS Uridine kinase signature 184 195 - -
Ahy17g0190 468 PRINTS Uridine kinase signature 38 55 - -
Ahy17g0190 468 PANTHER URIDINE KINASE 9 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0190 Ahy-Chr17 1896285 1901892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0190 3 460 PRT Gene Family AT4G26510 83.983 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0190 K00876 - gmx:100798205 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0190 17 1896285 1901892 Ahy7g0087 7 554376 559998 hybridization
Ahy17g0190 17 1896285 1901892 Ahy17g0190 17 1896285 1901892 PCT
Ahy17g0190 17 1896285 1901892 Ahy7g0087 7 554376 559998 PCT
Ahy7g0087 7 554376 559998 Ahy17g0190 17 1896285 1901892 PCT