Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0187 ATGGAGCAAAAGATTGTTATAAAGGTATCATGCAATAACAAATGCAGAAGGGGTTACTTGTGGAGTTGTGGTAAATGCAAAAGCAAGATCCTCAAAGTTGCGGCGGTTGAACCGGGTGTGAGTTCATTAGGGTTAGAAGGGGCAGAGAAAGATGAATTGGTGGTCATTGGAAATGGGGTGGATCCAGTTTGTTTGGCCAAGGCTTTGAGAAAGAAATTCAACGTTGCACAAATCATAAAGGTTGAAGAAATTAAGGAAGACAAAAAAGAAGGAAAAGAAGATTCGTCGCCGTCGCCGTCGCGGCCGCCGCCGTGGTCTTATGCTCCCGGCTACTACTGTCCACCGTATCCCCAGAGCGTAGTTTATGAAAACCCATATGGTAGTCAATGCATCATCATGAACAAGGACGAACATTCCAGATGCAAAGTCGAAACTACTTGTCGTCTTGCACAGGCACACTGCGCACCCAATTTCGATGACTACTATTCTTACCGATCCGATCCTTTCATCATGGCCATCTGGAAATGGAAATTTTCTGTGGATTGGATTATTCGGACTGCTTCTTGTGTCACGTTGTCTGCGAAAATAAGGGACAAGAAGGTTCCCATTACGTCTTTCGTTATTCGAATCATTGACTCTGCCAAAGATCGCAAGGTCTTGGCTAAATTAGAGGTAAAAGATAAATTGCTTAAAAAAGGAGGAAGATTTGACTGGAGAGTTGGGTCACTTCCAGCGAGATTCATTATTGACCTTGAGTTCCTCGATTTGAAAGCTTCATCTCCAAATGGAAAAGATGTTTGTTCCATTTGGCCTACCAAAATCATGAATCATCAGAAACCAAATTCTGGAGTTCTTGAATCTGTTGGTCGAATGCTGACAGAAAAAATCCATACTGACGTAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCACCGCGCAGTTCTTGCTGCTCGATCACCTGTTTTTCATGGCATGTTCAAACACAATCTAAAAGAGAAAGATGATTCCACCATAAACATCTCAGACATGTCAATAGAATCTTGTCAAGCATTCATAAACTATCTTTATGGTGTCATTGAAGATGAAGAATTTTTCAAGCATAGATTGGAGCTTCTTCATGCCGCAGACAAATATGACATTTGTGATTTAAGAGATGTATGCAGTGAGAGCCTTGCAGAGGATATGGATTCAAGCAATGTTCTTGAGAGGCTTCAGGATTCATATCTGTATCAATTGCCAAAGCTGAAGCATCATTGCATGCAATATCTTGTCAAGTTTGGAAGGATATTTGACATTAAAGATGATTTCGATGCATTCTTGCAAACTGTAGATAAGGATTTGGTTATTCAACTCCTTGGTGAAGTTCTTAATGTCTGGAAAGGCTCTTAA 1392 0.4095 MEQKIVIKVSCNNKCRRGYLWSCGKCKSKILKVAAVEPGVSSLGLEGAEKDELVVIGNGVDPVCLAKALRKKFNVAQIIKVEEIKEDKKEGKEDSSPSPSRPPPWSYAPGYYCPPYPQSVVYENPYGSQCIIMNKDEHSRCKVETTCRLAQAHCAPNFDDYYSYRSDPFIMAIWKWKFSVDWIIRTASCVTLSAKIRDKKVPITSFVIRIIDSAKDRKVLAKLEVKDKLLKKGGRFDWRVGSLPARFIIDLEFLDLKASSPNGKDVCSIWPTKIMNHQKPNSGVLESVGRMLTEKIHTDVTINASDGSIGAHRAVLAARSPVFHGMFKHNLKEKDDSTINISDMSIESCQAFINYLYGVIEDEEFFKHRLELLHAADKYDICDLRDVCSESLAEDMDSSNVLERLQDSYLYQLPKLKHHCMQYLVKFGRIFDIKDDFDAFLQTVDKDLVIQLLGEVLNVWKGS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0187 463 Gene3D Potassium Channel Kv1.1; Chain A 270 426 IPR011333 -
Ahy17g0187 463 SUPERFAMILY POZ domain 275 394 IPR011333 -
Ahy17g0187 463 CDD BACK 397 453 - -
Ahy17g0187 463 ProSiteProfiles BTB domain profile. 298 357 IPR000210 GO:0005515
Ahy17g0187 463 SMART BTB_4 298 396 IPR000210 GO:0005515
Ahy17g0187 463 CDD BTB_POZ_ZBTB_KLHL-like 297 379 - -
Ahy17g0187 463 Gene3D - 1 87 - -
Ahy17g0187 463 PANTHER OS08G0495500 PROTEIN 139 462 - -
Ahy17g0187 463 Pfam BTB/POZ domain 292 394 IPR000210 GO:0005515
Ahy17g0187 463 PANTHER OS08G0495500 PROTEIN-RELATED 139 462 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0187 Ahy-Chr17 1881774 1888708 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy17g0187 BTB 3.70E-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0187 K10523 - gmx:100790186 357.451