Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0186 ATGAAAGAACATTATTCCAGATGCAAAATCGAAACTACTTGTCGTCTTGCACAAGCACAATGCACATTCAATTTCGGTGACTATTATCTTTGCGAATCCGATCCTTTCACCATCGCCATCTGGAACTGGAATTTTTCTATGGATTGGGCTGCTTCTTGTATCACGTTGTCTGCGAAAATAAGGGACAAGGTTCCCATTGCGTCTTTCGTTATTCGAATAATTGACTCTGCCAAAGATCGCAAGGTCTTGGCTAAATTAGAGGTAAAAGATAAATTGCTTAAACAAGGAGAAAGATTTGAGTGGAAAGTTGGGTTACTTCCAGGGAGATTTATTATCGACCTTGAGTTTCTCGATTTGAAAGCTTCATCTCCAAATGGAACAGATGTTTGTTCCATTTGGCCTACCAAAATCATGAATCAGAAACCAAATTCTGCAGTTCTTGAATCTGTTGGTCGAATGCTGACAGAAAAAATCCATACTGACATAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCACCGCGCAGTTCTTGCTGCTCGATCACCTGTTTTTCATAGCATGTTCAAACACAATCTAAAAGAGAATCATGATTCCAACATAAACATCTCAGACATGTCAATAGAATCTTGTCAAGCATTCATAAACTATCTTTATGGTATCATTGAAGATGAAGAATTTTTCAAGCATAGATTGGAGCTTCTTCATGCGGCAAACAAATATGACATTTGTGGTTTAAGAGATGTATGCAGTGAGAGCCTTGCAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGGATTCATATATGTATCAATTGCCAAAGCTGAAGCTTCATTGCATGCAATATCTTGTCAAGTTTGGAAGGATATTTGACATTAAAGATGATTTCAATGCATTCTTGCAAACTGTAGATAAGGATTTGGTTATTCAACTCCTTGGTGAAGCTCTTAGTGTCTGTAAAGGCTCTTAA 978 0.3773 MKEHYSRCKIETTCRLAQAQCTFNFGDYYLCESDPFTIAIWNWNFSMDWAASCITLSAKIRDKVPIASFVIRIIDSAKDRKVLAKLEVKDKLLKQGERFEWKVGLLPGRFIIDLEFLDLKASSPNGTDVCSIWPTKIMNQKPNSAVLESVGRMLTEKIHTDITINASDGSIGAHRAVLAARSPVFHSMFKHNLKENHDSNINISDMSIESCQAFINYLYGIIEDEEFFKHRLELLHAANKYDICGLRDVCSESLAEDIDSSNVLERLQDSYMYQLPKLKLHCMQYLVKFGRIFDIKDDFNAFLQTVDKDLVIQLLGEALSVCKGS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0186 325 CDD BTB_POZ_ZBTB_KLHL-like 159 241 - -
Ahy17g0186 325 SMART BTB_4 160 258 IPR000210 GO:0005515
Ahy17g0186 325 Gene3D Potassium Channel Kv1.1; Chain A 134 288 IPR011333 -
Ahy17g0186 325 PANTHER OS08G0495500 PROTEIN 6 324 - -
Ahy17g0186 325 PANTHER OS08G0495500 PROTEIN-RELATED 6 324 IPR044714 -
Ahy17g0186 325 SUPERFAMILY POZ domain 140 256 IPR011333 -
Ahy17g0186 325 ProSiteProfiles BTB domain profile. 160 219 IPR000210 GO:0005515
Ahy17g0186 325 Pfam BTB/POZ domain 154 256 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0186 Ahy-Chr17 1874724 1877542 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy17g0186 BTB 4.20E-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0186 K10523 - gmx:100790186 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0186 17 1874724 1877542 Ahy7g0082 7 528389 530224 hybridization
Ahy17g0186 17 1874724 1877542 Ahy7g1305 7 27355019 27360992 PCT