Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0183 ATGGTTGATGAATTCATGGAGCAATTTCCCTTGATTCATCAAAGCTGTTCTTCTTCATCTTCAGGCAATAATGTGACAAGAGAATCTCCTAAGAGAATTGGTAACGTGTGGAGCGCGATAGCGCACATAATAACAGGAGTGATAGGGGCAGGGGTGCTGTCTCTAGCATGGTCGGTGGCGCAACTAGGTTGGATTGGAGGTCCGATTTGCATTGTGTTATTTGCAGTCACAACCATGGTTTCTTCAAACCTTCTTAGTGACTGCTATAGACACCCTCATCCTGAGTATGGTGCAACCAGGAGTTCCTCCTTCATAGATGCAGTCAAATTATTTTTAGGAGAGAAGAATAAACATGTGTGTGGAGTCATGGCTTATGCAACCATGTTTGGCATTACAACTGCCTTTGTTATTACATCTGCCACCAGCGTCAAGGCTATTCTGAAATCAAATTGTTACCACAAAGAAGCGCATAAAGCTCCATGTAAATATGGGGATACATTGTATATGATGCTATTTGGAGTTGTTCAGATTGTGATGTCATTCATACCTGATCTTCACAACATGGCATGGGTTTCAGTTGTTGCTGCCTTAATGTCCTTCACATATGCTACTATAGGACTTGGACTTGGCATCACAACAGTCATAGAAAATGGAAGAATTATGGGAAGTATAACAGGAGTAGCAGCTTCAAGTACTGCTGACAAATTGTGGTTAATCTTCCAAGCACTTTCTGATATTGCTTTTGCCTATCCATACTCAATCATACTCCTTGAGATACAGGACACTCTAGAGGCTCCTCCATCAGAGAACAAGACCATGAAGAAGGCCTCCATGATTGCCATATTCATCACAACATTCTTCTACCTCTGCTGTGGATGCTTTGGATATGCAGCTTTTGGAGATCAAACACCAGGAAATCTCTTAACTGGCTTTGGTTTCTATGAGCCTTATTGGCTTATTGACTTTGCCAATGCTTGCATTGTTCTTCATTTGATTGGAGGATATCAGATTTATTGTCAACCAATATACAATGCTGTTGATAGATGGTGCCAAAGAAAATACCCAAACAGTGAGTTTGTGAATAAATTCTACAGAATGAAGCTACCAAAGTTACCAGCATTTCAAGTGAATCTATTCAGAATATGTTTCAGAACAACCTATGTTGTTTCCACAACTGGACTTGGAATATTATTCCCTTACTTCAACCAAGTTCTTGGAGTGTTAGGGGCCATAAGCTTTTGGCCATTGGCAATATATTTCCCAGTTGAGATGTACTTTGTGCAGAAGAAAATTGAAGCTTGGTCAAGAAAATGGATTGTTCTTAGAATATTTAGTTTTGTTTGCTTTCTTGTCACAGTGTTAGGTCTTATTGGATCACTTGAAGGAATAATTAGTGCAAAACTTAGCTCATGA 1413 0.3977 MVDEFMEQFPLIHQSCSSSSSGNNVTRESPKRIGNVWSAIAHIITGVIGAGVLSLAWSVAQLGWIGGPICIVLFAVTTMVSSNLLSDCYRHPHPEYGATRSSSFIDAVKLFLGEKNKHVCGVMAYATMFGITTAFVITSATSVKAILKSNCYHKEAHKAPCKYGDTLYMMLFGVVQIVMSFIPDLHNMAWVSVVAALMSFTYATIGLGLGITTVIENGRIMGSITGVAASSTADKLWLIFQALSDIAFAYPYSIILLEIQDTLEAPPSENKTMKKASMIAIFITTFFYLCCGCFGYAAFGDQTPGNLLTGFGFYEPYWLIDFANACIVLHLIGGYQIYCQPIYNAVDRWCQRKYPNSEFVNKFYRMKLPKLPAFQVNLFRICFRTTYVVSTTGLGILFPYFNQVLGVLGAISFWPLAIYFPVEMYFVQKKIEAWSRKWIVLRIFSFVCFLVTVLGLIGSLEGIISAKLSS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0183 470 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 16 468 - -
Ahy17g0183 470 PANTHER OS05G0424000 PROTEIN-RELATED 16 468 - -
Ahy17g0183 470 Pfam Transmembrane amino acid transporter protein 34 464 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0183 Ahy-Chr17 1834622 1845863 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0183 31 451 Organic Solute Cotransporters AT1G77380 52.009 2.24e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0183 K24917 - gmx:100786621 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0183 17 1834622 1845863 Ahy17g0183 17 1834622 1845863 ECH
Ahy17g0183 17 1834622 1845863 Ahy7g0080 7 498577 507774 hybridization
Ahy17g0181 17 1827262 1830253 Ahy17g0183 17 1834622 1845863 PCT
Ahy7g0078 7 491185 493948 Ahy17g0183 17 1834622 1845863 PCT
Ahy17g0183 17 1834622 1845863 Ahy17g0183 17 1834622 1845863 PCT
Ahy17g0183 17 1834622 1845863 Ahy7g0080 7 498577 507774 PCT
Ahy7g0080 7 498577 507774 Ahy17g0183 17 1834622 1845863 PCT