Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0181 ATGGGGTTAGCAGCAGAACCAGCTTCAAGTAATGATGACAAGACACCATTGTTGCTCTCTCACCCTCTCAAAAGAACAGGGACGGTGTGGACGGCGGTGGCGCACATAGTGACAGGAGTGATAGGATCAGGAGTGCTGTCTCTGGCATGGAGCATTGGACAGCTTGGATGGATTGCAGGGCCATTCTCCATTCTCATCATTGCCTCATTCACTCTCATTTCTTCTTTCCTTCTTTCCAACACTTACCGTTCTCCACATCCTCAATTTGGACCTCACCGTAGTGCCTCTTACCTTGATGCTGTTCATTCTCATCTAGGACTAAAGAATGGACGGTTATGTGGCCTTCTTGTGAATATAAGCTTATATGGTTTTGGAATTGCTTATGTTATTACATCAGCTATCAGCATAAGAACAATCTTGGTTTCAATTTGTTACCATACCAATGAAGAAGAAGTAGCATGTGAGTTTGTAGATGCATATTATATGCTGATTTTTGGGGCTATACAAGTTGTACTCTCACAGATACCAAACTTCCATAACATTGAATGGCTTTCGGTTGTTGCTGCAATCATGTCATTTGCTTATTCTTTCATAGGAATGGCCCTTTCCATTCTGCAAATCAAAGAAAAAGGTTATGTTGAAGGTAGCATTGAAGGAATCAGAAGCAGGAGTAGAACTGAAAAGTTATGGCTTGTTGCTCAAGCACTTGGTGACATATCATATTCCTATCCATTCTCAACAATTCTCTTGGAAATTCAGGATACTCTAAAGTCACCTCCACCGGAAAACCAAACTATGAAGAAGGCCTCTGTGATATCGGTGGCGATCACAACGTTCTTCTACCTTGGCTGTGGAGGAGCTGGATATGCAGCTTTTGGTAATGATACACCAGGAAACCTCTTAACAGGTTTTGGATCCTCCAAGTATTATTGGCTTGTTAACTTTGCCAATGTTTGTATTGTGGTTCACCTTGTTGGTGCATATCAGGTGTATAGTCAGCCACTTTTTGCCATTGTTGAGAATTGGTTCCGCTTTCAATACCCGGATAATGAATTTGTGAATCACTCATATTTCTTGAAACTGCCATTTTTACCGGATTTTGAACTGAATTTTCTGAGGCTGTCTTTCCGAACCGCTTACGTGGCATCAACCACGGTGATTGCATTGATGTTCCCTTACTTCAACCAGATTTTGGGAGTACTAGGAAGCTTAATCTTTTGGCCATTAACCATATATTTTCCAGTGGAAATGTACTTAGGTCTGTCTAATACTGAAGCATGGAGTGCTAAGTGGATCATGCTTCGGAGTTTAAGCATTTTAGGCTTTGTTTTTGGTTTGTTTACTCTCATTGGTTCCATTCAGGGAATAGTAACTCAAAAATTAAGCTGA 1389 0.4111 MGLAAEPASSNDDKTPLLLSHPLKRTGTVWTAVAHIVTGVIGSGVLSLAWSIGQLGWIAGPFSILIIASFTLISSFLLSNTYRSPHPQFGPHRSASYLDAVHSHLGLKNGRLCGLLVNISLYGFGIAYVITSAISIRTILVSICYHTNEEEVACEFVDAYYMLIFGAIQVVLSQIPNFHNIEWLSVVAAIMSFAYSFIGMALSILQIKEKGYVEGSIEGIRSRSRTEKLWLVAQALGDISYSYPFSTILLEIQDTLKSPPPENQTMKKASVISVAITTFFYLGCGGAGYAAFGNDTPGNLLTGFGSSKYYWLVNFANVCIVVHLVGAYQVYSQPLFAIVENWFRFQYPDNEFVNHSYFLKLPFLPDFELNFLRLSFRTAYVASTTVIALMFPYFNQILGVLGSLIFWPLTIYFPVEMYLGLSNTEAWSAKWIMLRSLSILGFVFGLFTLIGSIQGIVTQKLS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0181 462 Pfam Transmembrane amino acid transporter protein 25 457 IPR013057 -
Ahy17g0181 462 PANTHER OS05G0424000 PROTEIN-RELATED 11 461 - -
Ahy17g0181 462 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0181 Ahy-Chr17 1827262 1830253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0181 23 457 Organic Solute Cotransporters AT5G09220 49.087 1.68e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0181 K24917 - gmx:100809376 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0181 17 1827262 1830253 Ahy17g0181 17 1827262 1830253 ECH
Ahy17g0181 17 1827262 1830253 Ahy7g0078 7 491185 493948 hybridization
Ahy17g0181 17 1827262 1830253 Ahy17g0183 17 1834622 1845863 PCT
Ahy17g0181 17 1827262 1830253 Ahy7g0080 7 498577 507774 PCT