Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0173 ATGTCATCATCACCATCATCATCATCATCAACATCATCATCATCATCAACATCTTCTCCTTCTCCTCCTCCTCCTCCTCCTTCAAATGCTGCTGCTTCCGACGCCAATGCTGCCCCCGAGTCTTCTTTTCGGAGGTCCACCCGCGAATTCGGAGAGTCTTCTACTGCTCGCCAGCAACGACTACGTGCCATGAACGAGGCTCTGCCCGAGGTCCTTCTCGAAATACTCGCTGCTCAAGTTGCCATTGATGCTTCCAACCGCCATGGTCGCTTGGCTGCTGCTCCTGCCGTTGCTCGTTTGTTTCAGGTTTGTTCTACATGGCGAGGGGTCTCACACTTGGATCCACTGTGGCAGAGACTTACCAGATTGATCTGGCGCCGGGCCTACTTAATACGCGACACGTGGCGAGAGGAGTACATCTACTGGCATCGGACGGCTAGGAACTTTGCATTGGGAGCACCCTCTTTCCATGTCCCACACTTCGATCCTTCTATGCCTCCCAATGGCGCCGGCGACCGTCAAACCCTCCTATGCCGCTGCCTTGCTCTCTCTGACCGACACCTCGCCTGCGGCTTTGCGGATGGCACCGTCCGCCTCTTCGACGTCGAGACTCTCGCCCACGTCAGCACATTCCGGACTAACCACGGGCCGCGGTTCGGCCCGTTCTCCCGGTCCGTGTCCGGAATAATCCTCTCTAACAGCACGCTCACCTTTGCTAGACTCGACGGGGATATTTTCGTGGCGTCGGTTAACGTGGCCAACGAACCACCGCAACAGGTGGTTGCGGGTGACGTGGTGAACAACGGCGTTTTAGTTGAGTTCGCGGGAAACAGTCGGTGGTGGGTGGGCTTATACGCAGGCCTTCCGGGCCGGGCTTTCCAAATATGGGACGCGCCCAACCAGCAACTGGTATCAGTGGGCGGGACGTTAACAGATCCGGAAACGGTTATGGGATGGCACATGCTAACAGAATTAGTTGAGCCAGTTGGGCGCGTGAGAGTAACGGAACCAGATTACGTCGTGGCGTGCACGAGCTCGAGATTAGTTTGTTTTAGTTTGTGGAACCCGGAGGAAGTTATACGTGACGTGGGTTCTGTTACGGGGTTCGTTGTAAGCAGTTTGGACGCGCGTCACGATGCGTTTGTGGTTGTCGAGAGGAACGGTTACGGTACGGTGCGACGCGCCAGCACGTTCGAGCGGTTGAGTAGGTTCCGATTGAGGCCTCAGTGGGTTAGGGGTTTGTTAGCGTGCATCAACTTGAGTTATGTGTTAACCTACTCCGGGGTCACTCGGATGCTAAGGGTTTGGAACATTGAGCAACTTGCTGGGGTTTTCTGTTGCGCGTTGGAAGTTAGGGATAATGCACCTGAGGGTAATGCCATGGTGGCAAATGAAAGACACGTGGCGATTTCTTGGAATGACACCTTCATACAGTTATTGGATTTTGGTGTATAG 1455 0.5464 MSSSPSSSSSTSSSSSTSSPSPPPPPPSNAAASDANAAPESSFRRSTREFGESSTARQQRLRAMNEALPEVLLEILAAQVAIDASNRHGRLAAAPAVARLFQVCSTWRGVSHLDPLWQRLTRLIWRRAYLIRDTWREEYIYWHRTARNFALGAPSFHVPHFDPSMPPNGAGDRQTLLCRCLALSDRHLACGFADGTVRLFDVETLAHVSTFRTNHGPRFGPFSRSVSGIILSNSTLTFARLDGDIFVASVNVANEPPQQVVAGDVVNNGVLVEFAGNSRWWVGLYAGLPGRAFQIWDAPNQQLVSVGGTLTDPETVMGWHMLTELVEPVGRVRVTEPDYVVACTSSRLVCFSLWNPEEVIRDVGSVTGFVVSSLDARHDAFVVVERNGYGTVRRASTFERLSRFRLRPQWVRGLLACINLSYVLTYSGVTRMLRVWNIEQLAGVFCCALEVRDNAPEGNAMVANERHVAISWNDTFIQLLDFGV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0173 484 Gene3D - 171 483 IPR015943 GO:0005515
Ahy17g0173 484 MobiDBLite consensus disorder prediction 1 58 - -
Ahy17g0173 484 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 30 483 - -
Ahy17g0173 484 SUPERFAMILY WD40 repeat-like 178 440 IPR036322 GO:0005515
Ahy17g0173 484 MobiDBLite consensus disorder prediction 1 17 - -
Ahy17g0173 484 SUPERFAMILY F-box domain 97 144 IPR036047 GO:0005515
Ahy17g0173 484 PANTHER WD40 REPEAT PROTEIN 12, 37 30 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0173 Ahy-Chr17 1768634 1772944 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Ahy17g0173 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0173 - - aip:107606416 925.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0173 17 1768634 1772944 Ahy7g0067 7 426238 430617 hybridization