Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0170 ATGGAAGCGGGGAAAGAGGAGGCACTCAAAGCAATAGAGATTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGCGCAAAAAACTATGCCATAAAAGCTAAGACACTATGTCCTGGATTGGAGGGTATATCTCAAATGGTGACCACATTTGAGGTTTACATTGCTTCTGAGATTAAACACAATGGTGAACTAGATTATTATTCGATTCTTGGATTGAAACCTTCTGCTGATAAAGAGGCTGTCAAGAGACAGTACAAGAAGATGGCTGTGTTGCTTCATCCTGATAAGAACAAATGTGTGGGAGCTGATGGGGCATTTAAGCTTGTTTCCGAGGCGTGGACTTGGCTGTCAGATAGTGCTTTGCGCAGTACATATGACCTCAAGAGAAATGGACAGATGGGTGGGATTACTCAGACAAATTTGTCTTCTCCCCATGCTACAGGTTATAGCAAAAGTTCCAATTTGCCGACTTCTCATGGTAGGCACGACACCTTTTGGACAATTTGCACCTCTTGTAAAGTTCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAAACTTTCGTGTAAGAACTGTCGTGGCACTTTTGTTGCTGTTGAAACTGGGGCTGCCCCAGCAAATGGTTCATTTCCATATTGTCCTTGGTCCTATGTGCCAGGAAATGGGTATGGAAGTCATTCCTATGATGGAGTTACGTATGTCCCAACCACTGCAGCGACCTATTTCAACGGCAACGGGGTCGCAGGATACCATTCTGGCCATGGGTATGAATACGTTTCAAATGTTTCATTTCAGTGGGGCTCTTCTGGACATGCGAATCAAAATGGACCAACGACCTTACCTACTGATTCTGTTTATCAAACCAATGGAAGTGTGAAGAGGGGAAGACCAAAAATCAAATCAGTTGATAAGATGCATCGTGTGGCTGAGACTGCGATCAACGCAAATTCAGATGTGTCGTTTGTTTATAATGAACAACAGGATCTTAAGATGAGTAGACCAGACAAGAAAAGGAAAGTAGTTGCGGCAGCCAATTTTAAAAATGGCTATGTTGAAATGGGGTCAAAATGTGCTTCTGAATCAATTTTGGCTAATGGCAATGAAAGCCTTGGACAAGGCCAGAAGGTTTCATGTGGAAGTGAAGTTCAAACCAAGCAGTGTTCCATGGCACCAGCTTTTGATGCGAGAAAATTATTGATTGAGAAGGCCAGGACTGAAATTAGAAAGAAACTGGAAGAGATGAAGTTGGCTTCCGAAATTGCTGCTGCAGCAGCTGTCAGTGCAAGAGAAAAATCTCAAGCTGAAGATGGTCAAGTAAAAAGGGAGACATGTAGAAGAACAGTTCTGAATGCTTCTGGGCATCAAGTAGAGCGCAAGAAAATTGGTCCAGCCGCTATAACTGTCCCAGATTCTGACTTCCATGACTTCGATAAAGATAGGTCAGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGAATGCCACGATTATATTGCCTGATCCGTGAGATTATCTCAGTTGATCCATTCAAGATTCACATTAGTTACTTAAGTTCCAAAACTGATAGTGAGTTTGGCTCGGTAAACTGGCTTGATTCGGGTTTTACCAAATCTTGTGGAAATTTCAGGGCATGGAATTCTGATGTTGTTGACCAAGTTAACATCTTCTCCCATCTTTTGAGTAAGGAGAAGGCTGGTCGAGGTGGTTGTGTACGCCTATATCCCAGAAGTGGAGATGTTTGGGCTGTTTATCGAAATTGGTCACCAGAGTGGAACAGATCTACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAAGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGCGTTTCGCCCCTTATCAAGCTGACCGGATATAAAACAGTTTATCAAAGGAATACAGATAAAAGTGCCATTAGATGGATACCAAGGAGAGAAATGTTGCGCTTTTCGCACCAAGTGCCATCATGGTTGCTGAAGGGGGAGGCAGAAAATTTGCCTGAAAAGTGCTGGGATCTTGATCCGGCAGCGACTCCGGATGAGCTTCTTCATGCAGCAGCTGCAGAAGCTGATGCTCTTTAG 2112 0.4351 MEAGKEEALKAIEIAEKRFAQRDFAGAKNYAIKAKTLCPGLEGISQMVTTFEVYIASEIKHNGELDYYSILGLKPSADKEAVKRQYKKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSALRSTYDLKRNGQMGGITQTNLSSPHATGYSKSSNLPTSHGRHDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGTFVAVETGAAPANGSFPYCPWSYVPGNGYGSHSYDGVTYVPTTAATYFNGNGVAGYHSGHGYEYVSNVSFQWGSSGHANQNGPTTLPTDSVYQTNGSVKRGRPKIKSVDKMHRVAETAINANSDVSFVYNEQQDLKMSRPDKKRKVVAAANFKNGYVEMGSKCASESILANGNESLGQGQKVSCGSEVQTKQCSMAPAFDARKLLIEKARTEIRKKLEEMKLASEIAAAAAVSAREKSQAEDGQVKRETCRRTVLNASGHQVERKKIGPAAITVPDSDFHDFDKDRSEECFKPKQIWALYDEEDGMPRLYCLIREIISVDPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAWNSDVVDQVNIFSHLLSKEKAGRGGCVRLYPRSGDVWAVYRNWSPEWNRSTPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLTGYKTVYQRNTDKSAIRWIPRREMLRFSHQVPSWLLKGEAENLPEKCWDLDPAATPDELLHAAAAEADAL* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0170 703 Pfam DnaJ domain 66 127 IPR001623 -
Ahy17g0170 703 Coils Coil 401 421 - -
Ahy17g0170 703 CDD DnaJ 66 119 IPR001623 -
Ahy17g0170 703 Pfam Domain of unknown function (DUF3444) 466 672 IPR024593 -
Ahy17g0170 703 PANTHER BNAC03G44070D PROTEIN 1 696 - -
Ahy17g0170 703 SUPERFAMILY Chaperone J-domain 58 131 IPR036869 -
Ahy17g0170 703 Gene3D DnaJ domain 55 145 IPR036869 -
Ahy17g0170 703 SMART dnaj_3 65 122 IPR001623 -
Ahy17g0170 703 PANTHER BNAC03G44070D PROTEIN 1 696 - -
Ahy17g0170 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Ahy17g0170 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Ahy17g0170 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Ahy17g0170 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0170 Ahy-Chr17 1740532 1744005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0170 5 303 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.366 1.95e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0170 - - gmx:100792639 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0170 17 1740532 1744005 Ahy17g0170 17 1740532 1744005 ECH
Ahy17g0170 17 1740532 1744005 Ahy7g0063 7 386285 389757 hybridization