Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0160 ATGTCTGGTGATGATGATGTTGTTGTTGGTGCCAACATTAATAATCTTGGTGCTAGCTTACTCATAACTAGCAGCAGGTACATCAAGATTTGGCATAGAACCACCAAATACATTGGAATTCTCATTTATCTCAAGAAATCAACACCATACACTGCATTGCCTCCTGCTAGATCCAAATCATACCATGAAATTGAGATTGCCTCTGATGATGATCAAGAGGAGAAAGTAGAGCATGATGGCCCTCTTTGTTCACCACTTTCTGATCAACACACTGAGGAGGGCCTTATTGGCAATGGGAACTATAAGGTGTTGCCAGGGCATGATGGAACAAGCTTCACCAAGTGTTTGTGGAATTGCTTCAAACGCAACAATTATGCAATTTCAGTGCTGTTATGCTCAGCTGGTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCTAAATATGGTTGGCATGATGGTGTTGCCATAGTAATTGCTGTTATCCTGATTGTTGCATTCCCTTCCATAACAAACTATTGGAGCGAAAGGAAGATGATGAAACTGTCAAAGAGAAAGGAGAAAATGATATTCACAGTTGAAAGGGAGGGCTTGTTGGAGAGGCGAATCGAGAAACCAATCTGTTACATTGACAAATTTGTTCTTTTGGTCTCAGTATCCGTTGCTCTTGTGGTGCTTATTCGCCTGATCTGCAAATCGAATGGGGACAGTGGTGATTTGCCAGAGCTTAAGGGGAATGTCTCAGTTGGTTTGGTGATGGAAGTTCTTCAGAGAACCTTTTTGAGGCCATATGGAAGGATTTCCATCTTAGCAGGTCTTGTTACTGTTGTAGTACTATGTGTGCAACATGGAGTGCCACTTATGGTTACAGTTTCTCTCTATTACCAGAAGGTAGTGTCCAGAAAAGATGCAGTCATAAATGGTTTATCAGCTTGTACAACAATGGGGCTAGTTACTGTCATCTGCATTGATGTATCTGGTGGATTGACATCCGAGCTGATGAAGGTTAGCAGAGTTTGGATGGGGGAGAAAGATATTAGCAAGGTTGAGGAATCAGAAGTTAATCAAGTTGTTCTCAGTATGCTTCAACAAGGAGTTGTTTTATCTGTGGCACCAGAGCTTCAGCTTTCTCCAATATCAAGTTCACTTATTTCATGGGCTGAAACAACATCGGGAATGAATAGAGAGTATTTTACAACAAAATTTGACACTCTAAAGCACAGAAAACTGGATTCTGACAAAGAAGGCAGTGGAGTTTTGTTGAAAAATGTTGGGGAGAATGATCAAAATCTGCACTTGCACTGGAGCGGTGATGCATCCACGGTATTGGATATGTGTTCACTATACTATGATAGCAAAGGGGAATGCCACACCATAGGGAATCAGAAAATCAAATTTGAAGAAGTGATTAAGGAGATGGAAAATAGTGGTCTGAAGCCAATTGCATTTGCTCATAAACAAACTACGGTGCAAGAACTTGAACAAGATGAATTGATATTGTTAGGATTGATGGGTCTCGAAGGAACATGTCAAGAATCCAGAAAACTAGCAATGGAAGAGCTCAGAGAAGCTGGATTAAAGATCATACTGGTCTCAGAGGATGCAATTCTGGTAGTGAATGACATAGCTCAGGAACTAGGATTTGAATTGACAGTAGATGACATTTTCCTTGAAGGAAAAGTACTTCAAGATTTGAATGGAAGTGCTAGATTGGATAAGGTGGACCTGGCCCTTATAATGGGAAGTTTTTGCCTTGAAGACAAGATTCTCATGGTACAGTGCTTTCAAGAAAAGGGTCATGTGGTTGCATTTGTTGGAAAAGGGACAAGTAGCCATAGTTCAGTTCTGCAAGTAGCTGATGTAGGCATAATCCATGATTCTCTAGGCACAGTAGTGGACACAGATAGTTCTGGAATAACCATCAGATGTTTCAATGCATTGAAACCAATTGTTATGGCTGGTAGAAATAACTACAGAAACATTCAGAAGTTCATTCAACTTCAACTCACCTTTAGCATATCAGGTTCACTCATAACCTTGATTACTACAATCTCCACAGGAGAATCACCCTTAACAGCATTCCAATTTATTTGGGTGAATTTTGTAATGTGCCTTCTTGGTGGCCTAATGATGATAATGGAGTTGAGTTGTGAGGAAAAGCTTCTTGCTATTCAATCATCAAGAAGGAGTCAATCAGTTATAACAAGAGAGATCTTGAAGAGCATAGCTGTTCAGGTTTTGTACCAGACTTGGGTATCGATGATGCTCAAATTCAGTGGCCATAGAACTAATGAAGAGAAAGAAGTTAGGAAAACCATGATCTTCAACTCATTCCTATTTTGCCAGGTCTTCAATCTACTCAACACCATGAATTTGTTGAAAAAGCAAGTTGTCAAAGTTGTTCTGAAAAGCTACTTTTTCTTGGTGGCTTTAGCTTTTTGCATTCTTGTGCAGGTGCTGATGATTGAGTATGCAAAATGCCTAGCATATTGCATGAGGCTGAATGTTCCACACTGGGCTATCTGTGTCCTTGTTGGTTTCTCTTCATGTGCATTTGAATGGATCCTGAAGAATCTAGTAGTGATTCTTAGCACCAATAATGCTTCAGAAACAAATTGA 2619 0.4021 MSGDDDVVVGANINNLGASLLITSSRYIKIWHRTTKYIGILIYLKKSTPYTALPPARSKSYHEIEIASDDDQEEKVEHDGPLCSPLSDQHTEEGLIGNGNYKVLPGHDGTSFTKCLWNCFKRNNYAISVLLCSAGLSFATEFKQEGPKYGWHDGVAIVIAVILIVAFPSITNYWSERKMMKLSKRKEKMIFTVEREGLLERRIEKPICYIDKFVLLVSVSVALVVLIRLICKSNGDSGDLPELKGNVSVGLVMEVLQRTFLRPYGRISILAGLVTVVVLCVQHGVPLMVTVSLYYQKVVSRKDAVINGLSACTTMGLVTVICIDVSGGLTSELMKVSRVWMGEKDISKVEESEVNQVVLSMLQQGVVLSVAPELQLSPISSSLISWAETTSGMNREYFTTKFDTLKHRKLDSDKEGSGVLLKNVGENDQNLHLHWSGDASTVLDMCSLYYDSKGECHTIGNQKIKFEEVIKEMENSGLKPIAFAHKQTTVQELEQDELILLGLMGLEGTCQESRKLAMEELREAGLKIILVSEDAILVVNDIAQELGFELTVDDIFLEGKVLQDLNGSARLDKVDLALIMGSFCLEDKILMVQCFQEKGHVVAFVGKGTSSHSSVLQVADVGIIHDSLGTVVDTDSSGITIRCFNALKPIVMAGRNNYRNIQKFIQLQLTFSISGSLITLITTISTGESPLTAFQFIWVNFVMCLLGGLMMIMELSCEEKLLAIQSSRRSQSVITREILKSIAVQVLYQTWVSMMLKFSGHRTNEEKEVRKTMIFNSFLFCQVFNLLNTMNLLKKQVVKVVLKSYFFLVALAFCILVQVLMIEYAKCLAYCMRLNVPHWAICVLVGFSSCAFEWILKNLVVILSTNNASETN* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0160 872 PANTHER CATION TRANSPORTING ATPASE 193 867 - -
Ahy17g0160 872 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 861 IPR023298 -
Ahy17g0160 872 PANTHER CATION-TRANSPORTING ATPASE PLANT 193 867 - -
Ahy17g0160 872 SUPERFAMILY HAD-like 320 707 IPR036412 -
Ahy17g0160 872 PANTHER CATION TRANSPORTING ATPASE 108 187 - -
Ahy17g0160 872 PANTHER CATION-TRANSPORTING ATPASE PLANT 108 187 - -
Ahy17g0160 872 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 329 506 IPR023299 GO:0000166
Ahy17g0160 872 Gene3D - 122 336 - -
Ahy17g0160 872 Gene3D - 647 861 - -
Ahy17g0160 872 Pfam Cation transporting ATPase, C-terminus 689 857 IPR006068 -
Ahy17g0160 872 Gene3D - 337 502 IPR023299 GO:0000166
Ahy17g0160 872 Gene3D - 503 646 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0160 Ahy-Chr17 1673476 1677468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0160 283 843 Primary Pumps ATPases AT3G63380 36.598 2.32e-104 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0160 K01537 - gmx:102661547 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0160 17 1673476 1677468 Ahy17g0160 17 1673476 1677468 ECH
Ahy17g0160 17 1673476 1677468 Ahy7g0053 7 325460 328872 hybridization