Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0152 ATGTCTGTGAATAAAAGAATTTCAGGATCAAATGGGAGGTTGCAACCAAGCATGAAGTCATGGAAGGTCAATGAGCCTCTAAATGGGTCTAATTCTCCTCATAGGACAACATGGAGGAGGAAGCCCTTGCTCCTTTTGATTGTTTTTGGTGTTATCATAGCAAGTTTCGGGTTTTTCTTGAGTTTCAAGAATAGTGAGTATTTGATGAGCAAGGAGAAAGAAGCTGCTTGTGAAGAGAGTTCAAGAATCTTGCTACAAAGATACAACATTAGCAGGAAGCAGCTTCATGCTTTGGCTTCCCTATTATCTGGATCAGATCAGATTTTCTCCAACTGTATTGATGAAAGAAGACTACAAATGCTGTTAAACAGTGGCATAACCTGCAATCCACAGTTAGTTTGTTGTCCAGAGAATCAGGAGTTACAAAAGAAGCATAGATGTTTTGCAGACACTGTAGAACCTATAGAACAATGCCCAATTCTCGAGGATTATGTCCGGACAAGGATTCAATTATCATTTCCATTTAAAAAATACGTATTGTTGGCATCACACTCTCTACTTTCGTCCAATTTGGTTGATTTTCTGTTCTGTGGAAAGAACATGTTGCAGTCATGGGAACTGCATGTCTCTGCAATTATGGACTATACAAGTTCATTAAATTTGGTTAAAGAGTACTGGTGGGTCCTTGTAGGAATTATAATATCATGCAATTTGTCTGGATTCTGTTTACTAAGAATTCAAAAGCAGAAGCTAGTTGAGGGACATCAAGTTAGTCATCAAAAGCAGCTGCGAGATTTATCCCGGAACCCTTTAAAGAGTGTTGGGACTTGGAGGAAATGGTCGCTAGCTATATTCTTGTCACTTGGAATACTTTTTTCCATTTGGTTATTCTGTGACTTATACACCGACTTTAAGCAGACAAGAGAAGAAATGCTTACCAATATGTGTGATGAGCGTGCCCGTATGCTTCAAGATCAGTTTAATGTCAGCATGAACCATGTTCATGCTCTGGCTGTTCTTGTTTCTACATTTCACCATGGTAAACATCCATCTGCAATGGACCAGACAATTTTTGGAGAATATACTGAGACTACTGCATTTGAGAGACCACTTACTAGTGGTGTTGCTTATGCTAAGAAAGTTCTCCACTCTGATAGGGTGGAGTTTGAGAAGCAGCACGGGTGGACTATTAAGAAAATGGAAACTGAGAATGAAGCACTAGTCCAAGATTGTATTCCAGAAAAATTGGATCCGGCGCCCATTCAGGATGAATATGCACCAGTGATTTTTGCTCAAGAAACGGTTTCTCATATTGTGTCTATTGACATGATGTCAGGGAAGGAGGACCGTGAGAATATCTTGCGAGCAAGGGCAACAGGAAAGGGGGTTCTGACATCCCCTTTTAAACTTCTAAAATCAAATCACCTTGGTGTTGTACTTACATTTGCTGTTTATAACAGCAATGTTCCTGCAGATGCTACACCAGAGCAGCGAATCGAAGCTACTGTGGGGTACCTGGGTGCATCATATGATGTTCGATCACTGGTGGACAAGCTTCTCCACCAACTTGCAAGCAAGCAAATAATTGTTGTAAATGTTTATGATACAACCAACGCATCTGCACCGATCACAATGTATGGTACTGATGTTGCTGATACTGGACTACTACGTATAAACAGTCTAGATTTTGGGGATCCACTTCGAAAACATGAAATGCACTGCAGGTTCAAGCAGAGGCCTCCTCTACCTTGGAAAGCAATCAATTACTCGGTTGGCATATTTCTCATCGTTTTGCTTATTGGTTATATATATTATGTAGCCATAAAACGAATAGAAAAGGTGGAGGATGACACTCAAAAAATGGAGGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTTGCAAAATCTCAGTTTCTTGCAACAGTTTCTCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGACACTGAACTTGATGAAAATCAGATGGATTATGCCCAAACTGCGCATAAGAGTGGTAAGGATCTTATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGCAAGCTTGAACTTGAAGCTGTAGCTTTTGATCCACATGCTATTCTAGAGGAAGTTCTATCACTTTTCTCGGGAAAAGCTAAAGAAAAAGGAATTGAGTTGGCTGTTTATGCATCCAATGAAGTACCCAAAGTTGTCATTGGCGATCCTAAACGGTTCTGGCAAATAATTACCAATCTTGTTGGCAATTCACTCAAGTTCACTCATGATAAAGGACATGTGTTTGTCTCTGTTCATCTGGCAAATGAAGTGAAGAACCCACTTCATGGCATGGATGCAGTGCTGAGGGAAGGCTTAAAATTGGATCATGATTTGTCAGACAATACATATAATACATTAAGTGGGTTCGCTGTAGGAAACCGATGGAAAAGTTGGGCCAACTTTAAAAAGTTAAATAGTATGGATTTGATGGAAGAGCCTGAATTGATTCAGTTACTAGTAACAGTTGAGGATACAGGTATAGGAATTCCTATTGATGCGCAAAGCCGTATATTCACACGTTTTATGCAGGCCGATAGTTCGACCTCTCGAACATATGGTGGAACTGGAATAGGACTGAGCATTAGTAAATGTCTTGTTGAGCTCATGGGAGGAGAAATTGGTTTTGTTAGTGAGCCTGGAACTGGCAGTACTTTTACATTTACTGCAACTTTCAGAAAAGGAGAAACCACATCTTTGGATGCAAAGTGGCAGAATTTCAGTACATTTGATTCACAGTTGCAAGGGTTGAGAGCATTAGTGGTAGATAGAAGAAAAATTCGAGCTGAGGTCACAAGATATTATCTACAGAGGTTGGGGATGTCGGTGGATGTTATGTCAAGTTTGAAATCTGCATGTTCTTGTCTAACTGGTTCTTGCAACATGAGAGTGTCGAAGCAGTTTGCGATGATTCTGATAGACAAGGATGCTTGGGATAAGGAAAGTAGCACCTTATACTCCATCAAGAAACAGAAAAAGAATGGCATCAATGGAGACCGAATAAACTTTCCAAAAGTTTTTCTCCTGGCCACACACCTTAGCCCGAACGAATGTGATGAGCTCAAGACAAATGGTGTCATTGATGATATATTAATGAAGCCTTTTTGGCTCAGTGTTTTGGTTTGCTCCTATAGAGAATCCCTTGGAATTGAAAAAAGGCAAATAAATAGGAAGAAAGTATCCAAACTTGGGAATCTATTATTACAGAAAAGAATTTTGGTGGTTGATGATAATGCAGTGAACAGAAAAGTTGCAGAAGGTGTTTTACAGAAATATGGGGCAACAGTTACTTGTGTTGAGGGTGGCAGGGCTGCTCTACAGATGCTTAAGCCACCGCACAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAAGTGACAAGGCAAATCCGCATCCTAGAGAACGACGTAAATGAGAAAATTGCATGTGGGGAAGCATCAGCTGAAATGTTTGGGGATATCTTTTACTGGCACATTCCAATACTAGCAATGACAGCTGATGTAACTCAGGCTTCAAATGAAGAGTGCAAAAAGTGTGGGATGGATGGCTATGTGTCAAAGCCGTTCGAGGAAGAGCAGCTCTACACGGCCATGGCGCGCTTCTTCAAGCCTAGTTCATAG 3711 0.4053 MSVNKRISGSNGRLQPSMKSWKVNEPLNGSNSPHRTTWRRKPLLLLIVFGVIIASFGFFLSFKNSEYLMSKEKEAACEESSRILLQRYNISRKQLHALASLLSGSDQIFSNCIDERRLQMLLNSGITCNPQLVCCPENQELQKKHRCFADTVEPIEQCPILEDYVRTRIQLSFPFKKYVLLASHSLLSSNLVDFLFCGKNMLQSWELHVSAIMDYTSSLNLVKEYWWVLVGIIISCNLSGFCLLRIQKQKLVEGHQVSHQKQLRDLSRNPLKSVGTWRKWSLAIFLSLGILFSIWLFCDLYTDFKQTREEMLTNMCDERARMLQDQFNVSMNHVHALAVLVSTFHHGKHPSAMDQTIFGEYTETTAFERPLTSGVAYAKKVLHSDRVEFEKQHGWTIKKMETENEALVQDCIPEKLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNSNVPADATPEQRIEATVGYLGASYDVRSLVDKLLHQLASKQIIVVNVYDTTNASAPITMYGTDVADTGLLRINSLDFGDPLRKHEMHCRFKQRPPLPWKAINYSVGIFLIVLLIGYIYYVAIKRIEKVEDDTQKMEELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDENQMDYAQTAHKSGKDLISVINEVLDQAKIEAGKLELEAVAFDPHAILEEVLSLFSGKAKEKGIELAVYASNEVPKVVIGDPKRFWQIITNLVGNSLKFTHDKGHVFVSVHLANEVKNPLHGMDAVLREGLKLDHDLSDNTYNTLSGFAVGNRWKSWANFKKLNSMDLMEEPELIQLLVTVEDTGIGIPIDAQSRIFTRFMQADSSTSRTYGGTGIGLSISKCLVELMGGEIGFVSEPGTGSTFTFTATFRKGETTSLDAKWQNFSTFDSQLQGLRALVVDRRKIRAEVTRYYLQRLGMSVDVMSSLKSACSCLTGSCNMRVSKQFAMILIDKDAWDKESSTLYSIKKQKKNGINGDRINFPKVFLLATHLSPNECDELKTNGVIDDILMKPFWLSVLVCSYRESLGIEKRQINRKKVSKLGNLLLQKRILVVDDNAVNRKVAEGVLQKYGATVTCVEGGRAALQMLKPPHNFDACFMDLQMPEMDGFEVTRQIRILENDVNEKIACGEASAEMFGDIFYWHIPILAMTADVTQASNEECKKCGMDGYVSKPFEEEQLYTAMARFFKPSS* 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0152 1236 Pfam His Kinase A (phospho-acceptor) domain 634 699 IPR003661 GO:0000155|GO:0007165
Ahy17g0152 1236 ProSiteProfiles Response regulatory domain profile. 1095 1232 IPR001789 GO:0000160
Ahy17g0152 1236 SUPERFAMILY CheY-like 937 1070 IPR011006 -
Ahy17g0152 1236 Gene3D - 606 697 - -
Ahy17g0152 1236 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 746 916 IPR003594 -
Ahy17g0152 1236 Gene3D CHASE domain 353 580 IPR042240 -
Ahy17g0152 1236 PANTHER HISTIDINE KINASE 2 268 1233 - -
Ahy17g0152 1236 SUPERFAMILY CheY-like 1094 1232 IPR011006 -
Ahy17g0152 1236 Gene3D - 302 352 - -
Ahy17g0152 1236 Gene3D - 67 105 - -
Ahy17g0152 1236 Pfam CHASE domain 352 546 IPR006189 -
Ahy17g0152 1236 Gene3D - 698 920 IPR036890 -
Ahy17g0152 1236 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 621 700 IPR036097 GO:0000155|GO:0007165
Ahy17g0152 1236 SMART HKATPase_4 746 918 IPR003594 -
Ahy17g0152 1236 Gene3D - 1090 1235 - -
Ahy17g0152 1236 ProSiteProfiles Response regulatory domain profile. 942 1072 IPR001789 GO:0000160
Ahy17g0152 1236 CDD REC_hyHK_CKI1_RcsC-like 1096 1228 - -
Ahy17g0152 1236 Pfam Response regulator receiver domain 1096 1228 IPR001789 GO:0000160
Ahy17g0152 1236 MobiDBLite consensus disorder prediction 1 35 - -
Ahy17g0152 1236 ProSiteProfiles Histidine kinase domain profile. 641 918 IPR005467 -
Ahy17g0152 1236 SMART CHASE_2 349 548 IPR006189 -
Ahy17g0152 1236 PRINTS Bacterial sensor protein C-terminal signature 878 896 IPR004358 GO:0016310|GO:0016772
Ahy17g0152 1236 PRINTS Bacterial sensor protein C-terminal signature 902 915 IPR004358 GO:0016310|GO:0016772
Ahy17g0152 1236 PRINTS Bacterial sensor protein C-terminal signature 843 857 IPR004358 GO:0016310|GO:0016772
Ahy17g0152 1236 PRINTS Bacterial sensor protein C-terminal signature 861 871 IPR004358 GO:0016310|GO:0016772
Ahy17g0152 1236 SMART HisKA_10 634 699 IPR003661 GO:0000155|GO:0007165
Ahy17g0152 1236 CDD HisKA 634 695 IPR003661 GO:0000155|GO:0007165
Ahy17g0152 1236 SMART REC_2 1094 1228 IPR001789 GO:0000160
Ahy17g0152 1236 PANTHER TWO-COMPONENT HISTIDINE KINASE 268 1233 - -
Ahy17g0152 1236 ProSiteProfiles CHASE domain profile. 349 573 IPR006189 -
Ahy17g0152 1236 Coils Coil 611 631 - -
Ahy17g0152 1236 CDD HATPase_EvgS-ArcB-TorS-like 753 916 - -
Ahy17g0152 1236 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 688 913 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0152 Ahy-Chr17 1607379 1615911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0152 42 1234 Miscellaneous Gene Families AT5G35750 57.606 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy17g0152 CHASE 3.70E-34 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0152 K14489 - gmx:100805107 1885.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0152 17 1607379 1615911 Ahy17g0152 17 1607379 1615911 ECH
Ahy17g0152 17 1607379 1615911 Ahy7g0046 7 271498 280309 hybridization