Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0144 ATGCAGGCATCAGAGCATCATAGAAGTTCAAGTATGTACTATCAACCAATGCAGCAGGTTGAGGCATACTGCATGCCGCAATATCAAGCTCTGAATCATCATCAGTATTACAATGATGGAGGCCATGGTATTGGAAGCAGATTCTCTAATCAAAGTTCTTCTGAAATTTACTGCACATTGGAGTCATCATCTGCAACCGGCAGTTTTAATGTTTACAATTCTCCTTCAACTGTTAGTTTCTCACCAAATGGTAGCCCGGTTTCTCTTCAAGATTCTCAATCTCAGTCATATCCACCTGACAATAACTATGGATCTCCTATGAGTGGTTCGTGCATAACTGACGATTTAAGTACCTTCAAGCACAAGCTGAGAGAGTTGGAGAGTGTGATGTTTGGTCCTGATTGTGATAATCTTGATAGTTATGACAGTTCATTCAAGGATGCAACTGATTTCATGTCATCCGAGATGGACAGCTGGAGACAAACAATGGTGGCAATTTCTTGCAAGAACTTAAAGCATGTACTCGTCGTGTGTGCGAAAGCAATTGCAGAGAATGATCTGCTAATGGCACAAAGGTTGATGGATGAACTGAGGCAGATGGTGTCTGTATCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGCCTAGTTGCACGGCTGTCTTCCTCCGGGAGTTCAATCTACAGAGCCTTGAGATGCAAGGAACCAGAAAGTGCTGAGCTCCTCTCCTATATGCACATACTCTATGAGGTTTGCCCCTACTTCAAATTCGGATACATGTCTGCGAATGGAGCAATCGCAGAAGCTATGAAGGATGAAGACAGAGTTCACATAATTGATTTTCAAATTTCTCAAGGGAGCCAGTGGATCACTTTGATTCAAGCTTTTGCAGCTAGGCCTGGAGGACCACCACACATCCGAATTACAGGTATTGATGATTCAACATCGGCTTATGCGCGCGGTGGTGGGCTGCACATTGTGGGAAAGAGGTTGTCCAAGCTTGCAGAGCATTTTAAAGTGCCATTTGAATTTCATGCTGCAGCTATATCTGGTTGTGATGTTCAGCTGCATAATCTTGGTGTTCGACCGGGCGAGGCATTAGCTGTGAATTTTGCATTCATGCTACATCACATGCCAGATGAAAGTGTCAGCACCCTGAATCATAGGGATAGGCTCTTGAGGCTGGTCAAGAGCCTATCCCCGAAAGTGGTGACATTGGTGGAGCAGGAATCCAACACCAACACAGCTGCATTCTTTCCACGTTTCCTCGAAACTATGGACTACTACACAGCCATGTTCGAGTCGATAGACGTGACTCTTCCGAGGGAACATAAAGAGAGGATCAATGTGGAGCAGCATTGCTTGGCAAGGGATTTGGTTAACATCATAGCATGTGAAGGGGTTGAGAGAGTGGAAAGACATGAAGTGCTTGGGAAATGGAGGTCAAGGTTTGCAATGGCTGGTTTCAGTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATCAAGAAACTGCTTGATAACTACAGTGATAGATATAGGCTTGAAGAGAGAGATGGAGCATTGTATCTTGGTTGGATGAATAGAGATTTGGTTGCCTCTTGTGCATGGAAATGA 1626 0.4446 MQASEHHRSSSMYYQPMQQVEAYCMPQYQALNHHQYYNDGGHGIGSRFSNQSSSEIYCTLESSSATGSFNVYNSPSTVSFSPNGSPVSLQDSQSQSYPPDNNYGSPMSGSCITDDLSTFKHKLRELESVMFGPDCDNLDSYDSSFKDATDFMSSEMDSWRQTMVAISCKNLKHVLVVCAKAIAENDLLMAQRLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSSSGSSIYRALRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQISQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGKRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTLNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFSPYPLSSLVNGTIKKLLDNYSDRYRLEERDGALYLGWMNRDLVASCAWK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0144 541 Pfam GRAS domain family 171 541 IPR005202 -
Ahy17g0144 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Ahy17g0144 541 Coils Coil 180 200 - -
Ahy17g0144 541 MobiDBLite consensus disorder prediction 82 104 - -
Ahy17g0144 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Ahy17g0144 541 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0144 Ahy-Chr17 1560750 1563699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0144 12 541 GRAS Transcription Factor Family AT5G48150 66.791 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy17g0144 GRAS 2.80E-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0144 - - gmx:100808300 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0144 17 1560750 1563699 Ahy17g0144 17 1560750 1563699 ECH
Ahy17g0144 17 1560750 1563699 Ahy7g0025 7 147111 150095 hybridization