Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0114 ATGGAGGAAAAGATTAACTACAAATCGGAGGTAGACATTGTTCTTGTGTATGAAAAACATGTGGCTTTACCTGCTCAGTACTTAGTTTCTGAAGTAGTTTCAGCTTGTGTGGGTTTATTCTTCTGCTACTTTGTGTGTTTTGTGAGGAATGACATTCTTACATTCTCTTGGGTTGGTCCTCTTATTGCTGTTGGCAATAAGAAGACCTTGGACCTTGAGGATGTGCCACAACTAGATAGCAGCGATAGTGTGGTTCGAGCCTTTCCGAAATTCAGAGAAAAGGTGGAGGCAGATTGTGGTGCAGTTAACAATTTGACCACAATTAAGTTGGTGAAGTTGTTGATAATCTCGGAATGGAAGGAGATTCTCTTCACAGCAGTTCTTGCATTGTTGAACACTTTGGCTTCTTATGTTGGTCCTTATCTCATTGTTGCTTTTGTTCAATACCTTGATGGACAAAGGCTATATGAGAATCAGGGCTATGTTTTGGTTTATACATTTTTCTTGGCGAAGCTTGTTGAGTGTTTGACTCAGAGGCATTGGTTCTTTAGGTTGCAGCAAATTGGACTTCGAATGCGAGCACTACTTGTGACCATGATCTATAATAAATCATTGACACTTTCATGTCAATCAAAGCAAGGCCATACTTCCGGGGAAGTAATCAACTTCATGTCAGTTGATGCTGATAGAATTGGTGTCTTCAGTTGGTACATTCATGATTTGTGGATGGTAGCTCTGCAAATTTCTTTAGCCTTGTTGATTTTGTATAAAAGCCTTGGCCTTGCTTCAATTGCTGCATTTGTTGCAACCATTGTTGTAATGTTGGCAAATGTCCCCTTGGGATCATTGCAAGAAAAATATCAGGATAAGTTGATGGATTCAAAAGATATAAGAATGAAGGCAACATCAGAGATTCTCAGGAACATGAGGATTCTCAAACTTCAAGGGTGGGAAATGAAGTTTCTGGCTAAGATAACTGAACTCAGGAAAACCGAGAAGGGCTGGTTAAAGAAATTTGTTTATACATCAGCCATGACCACATTTGTGTTCTGGGGTGCTCCAACATTTGTATCTGTGGCTACTTTTGGAACTTGTATGCTTATGGGGATTCCACTTGAATCAGGGAAGATCTTGTCTGCACTTGCTACCTTCCGGATTCTTCAAGAGCCTATATATAATCTTCAAGATACAATTTCAATGATAGCACAAACTAAGGTTTCCGTTGATAGGATCTCATCATTCCTTCGACTTGACGACTTGCAGTCCGACGTTGTAGAGAGGCTTCCTCGCGGTTCTTCTGATAAAGCAATTGAAGTGGTAGATGGAAATTTCTCTTGGGATTTATCTGCACCGAATGCAACATTGAAGAACATAAATCTCACAGTTCTACATGGCATGAGGGTTGCTGTTTGTGGTACTGTAGGATCAGGCAAGTCTACGTTACTTTCCTGTATATTAGGAGAAGTGCCAAAGAAATCAGGTATCTTGAAGGTGTGTGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGCGGAAAGATAGAGGATAATATATTGTTTGGACAGGAGATGGATAGGGAAAGGTATGAGAAGGTACTTGAATCTTGTTGCTTGAAGAAGGATGTAGAAGTTTTGTCCTTTGGTGATCAGACAGTTATAGGAGAACGCGGTATCAATTTGAGTGGAGGACAGAAACAAAGAATACAAATTGCTCGTGCCCTTTACCAAGATGCTGATATATATTTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAAGCTTGCTTGGCCAACTAA 1827 0.4028 MEEKINYKSEVDIVLVYEKHVALPAQYLVSEVVSACVGLFFCYFVCFVRNDILTFSWVGPLIAVGNKKTLDLEDVPQLDSSDSVVRAFPKFREKVEADCGAVNNLTTIKLVKLLIISEWKEILFTAVLALLNTLASYVGPYLIVAFVQYLDGQRLYENQGYVLVYTFFLAKLVECLTQRHWFFRLQQIGLRMRALLVTMIYNKSLTLSCQSKQGHTSGEVINFMSVDADRIGVFSWYIHDLWMVALQISLALLILYKSLGLASIAAFVATIVVMLANVPLGSLQEKYQDKLMDSKDIRMKATSEILRNMRILKLQGWEMKFLAKITELRKTEKGWLKKFVYTSAMTTFVFWGAPTFVSVATFGTCMLMGIPLESGKILSALATFRILQEPIYNLQDTISMIAQTKVSVDRISSFLRLDDLQSDVVERLPRGSSDKAIEVVDGNFSWDLSAPNATLKNINLTVLHGMRVAVCGTVGSGKSTLLSCILGEVPKKSGILKVCGTKAYVAQSPWIQSGKIEDNILFGQEMDRERYEKVLESCCLKKDVEVLSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEACLAN* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0114 608 CDD ABC_6TM_ABCC_D1 124 411 IPR044746 GO:0140359
Ahy17g0114 608 Pfam ABC transporter transmembrane region 123 390 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0114 608 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 9 50 - -
Ahy17g0114 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 434 602 IPR027417 -
Ahy17g0114 608 SMART AAA_5 464 606 IPR003593 -
Ahy17g0114 608 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 9 50 - -
Ahy17g0114 608 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 52 606 - -
Ahy17g0114 608 Gene3D ABC transporter type 1, transmembrane domain 102 417 IPR036640 GO:0005524|GO:0016021
Ahy17g0114 608 CDD ABCC_MRP_domain1 437 606 - -
Ahy17g0114 608 Pfam ABC transporter 455 589 IPR003439 GO:0005524
Ahy17g0114 608 SUPERFAMILY ABC transporter transmembrane region 116 416 IPR036640 GO:0005524|GO:0016021
Ahy17g0114 608 Gene3D - 418 607 IPR027417 -
Ahy17g0114 608 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 123 403 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy17g0114 608 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 52 606 - -
Ahy17g0114 608 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 437 606 IPR003439 GO:0005524
Ahy17g0114 608 ProSitePatterns ABC transporters family signature. 562 576 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0114 Ahy-Chr17 1311537 1314704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0114 437 604 Calmodulin-binding Proteins AT2G36910 32.967 2.88e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0114 - K05666 gmx:100811245 1004.2