Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0077 ATGAACAACATCGTCGACAACTCCTCCTGGGCTCATTCTGGTTCTCCCAACACAGGTCGTGCATGCGTGGTTACGGTTGGTGTTGATGTTGCGGCTTCGTCTTCTTCGTCGTGTGATCATCTTATTCGGAGGCGCAACCCTAGAAAGAAGATCACAAAATTGATGAGGGTAATGGAGGAAGGGGTGAAGGTCAAGGGGAAGGGTGGTTGCAAGAAGCCAGACCCTGAGGCCCCAAAGATCACCCGTCCCTGCACCGAGTGCGGCAAGAGGTTCTGGTCCTGGAAGGCTCTCTTCGGCCACATGCGCTGCCACCCAGAGCGCCACTGGCGAGGGATCAATCCTCCCCGCACCCTCATCAGACCACCACCGCAAGAAGACGTGGGCGTCACCTTCACCCCGGAGGACCACGAGGTTGCGGCGTGTCTACTGTTGCTGGCGAGTGGGAAGGGGAAGGAGAGGGGCAATGATGACTACGACAACATAGTAGTGGACAACGTGGTGGACGAGGAGGAACAAGAACAAGAACAGGAGCGGTTCGAGTGCTCCAGTTTCAACAACGCACTTGGAGGAGGCCATAACTGTAGCATAACTGCACCCTCCCCCACCCCCGTTGACCTCCATCAACAACACCACCATTGCTCTTTGGATTTGAGGTTGGGTCTTAATTAG 669 0.5561 MNNIVDNSSWAHSGSPNTGRACVVTVGVDVAASSSSSCDHLIRRRNPRKKITKLMRVMEEGVKVKGKGGCKKPDPEAPKITRPCTECGKRFWSWKALFGHMRCHPERHWRGINPPRTLIRPPPQEDVGVTFTPEDHEVAACLLLLASGKGKERGNDDYDNIVVDNVVDEEEQEQEQERFECSSFNNALGGGHNCSITAPSPTPVDLHQQHHHCSLDLRLGLN* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0077 222 SUPERFAMILY beta-beta-alpha zinc fingers 83 107 IPR036236 -
Ahy17g0077 222 Pfam C2H2-type zinc finger 83 106 - -
Ahy17g0077 222 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 32 189 - -
Ahy17g0077 222 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Ahy17g0077 222 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 104 IPR013087 -
Ahy17g0077 222 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 32 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0077 Ahy-Chr17 1022767 1023783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0077 35 195 C2H2 Transcription Factor Family AT4G35280 41.243 3.00e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0077 - - adu:107496069 404.831