Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0076 ATGGAATATGGTGGCATAGTGCACAATGAAAATGGTGCGTTTGGGAGCTTGTCGGAGTCAGCGGTAGAGGCAGAAGTAGATTTGGTGGACGAGCTACTGGTGGAGGGGTGCTGGGTGGAGACAACTAGTGCAGGAGGGTGCTACAACTGGATGCATAATCCATCAGATGCAGTAGTGGCGCCGCAACCACAGTACTTGGAAATGCTGCAGCTGCAGCTGCAGGAGGAATCATCATCGTCGTCATCAGATCAGGAGAGCCTTGTGGGCAAGAGGTGGTGGATCGGGCCTACTAGGCCGGGCCCTTCATCATCTTCTTCTTCTTCCTCCTCGGTAAAGGAGAGATTAGTGGTCGCGGTCGGGTACTTGAAAGACTACACAAAGAACAACAATCTGCTCATTCAGATATGGGTGCCCCCACGGAGATCACCACTACCCCTTCCCCTTCCCCTTCCCCTTGATGTGCTCACCTTTCCCAACCCCAGCCCTAACCCTAACCCTAACCTATGCGTTCGCTTCTTGAGAAGCCATGAGTATTCTCATCATTATCAGGCGCAGCAGCACTACGATCTCCGTGGATCCATCGCCTTACCCGTCTTTGAACGAGGCACTGCCACGTGCCTTGGCGTCCTCGACATTCTCATCACCAACCACCTCAACCTCACCAACAACTATCGCCCTCAGCTTGATAATGTCTGCAACGCTCTCGAGGCTGTCGATTTTAGGAGCTCTCATCAGAACTTGAACGCGAATTTTATGCCGCCGGCCATAAAGGTGTATGAGGAGCTATACCAAGCAGCACTGAATGAGATAGTGGAGGTGTTGACATCGGTGTGCAAGACGCAGAATCTTCCTCTAGGGCTGACATGGGCGCCGTGCATCCAACAAGGAAAGTGTGGGTGCGGGCACTCATCGGCAATGTGCGTGTCCACGGTGGATACAGCGTGCTATGTGGGGGATCTGGAAATGCTGGGCTTCCAGGAGGCGTGCTCAGAGTACCACCTCTTCAAGGGGCAAGGCATAGTTGGCACCGCCTTCACATCAGCCAAGCCCTGTTTCGCAATCGACATAACAGCCTTCAGCAGAGCAGAATACCCGCTTTCTCACCTCGCTAACATCTTTGGCTTGCATGCCGCCGTCGCCATCCCCCTCCGCAGCCTCTACACCGGATCCGCTGACTTCGTCTTGGAGTTCTTCCTGCCAAAGGACTGCCATGACACCGAGCAGCAGAAGCACATGCTCAATTCCCTCTCCATGCTCGTCCAGCAAGCTTGCCGGAGCTTGCACGTTGCCACCGAAGACGACTTCACCCCTCCGATGCTCACTCATCATCAAGCGCAAGCACAAATAATGGAAGAGGCGTGCTCGAAGGATCAGTCGTGGATAGCGCACATGATGGAGGCGCAGGTGCAGCAGAAGGGGAAAGGGGTGTGCGTGTCGTTGGAGTACCAAATGGAAGAGCCCAAAGAGGAGTTCAAGGTGACAACCAACTGGGACACCGCCAACGACCAAGCCCATCACCAGCTGTTCTCCTCATCAGATTTCGGCCACATTGACGTGCTTGAGCACAGTAGGTCGAGGGCCAGCACTGCCGTGGACGGCGGCGAGGAGTCTTACGCCTTGGGTGGGCGGCGCTCCTCTTCTTCGGGTTCGGGCGGCAGGAAGTCAGGCGACAAGAGGCGAACCAAGGCTGAGAAGACTATCAGCCTGCCTGTCCTCAGACAGTATTTCGCCGGAAGCCTCAAAGACGCTGCCAAGAGCATTGGAGTGTGTCCCACGACTCTGAAAAGGATATGCAGGCAGCATGGGATAACAAGGTGGCCTTCCAGGAAAATAAAGAAGGTAGGGCACTCTTTGAAGAAACTTCAGCTTGTGATCGATTCGGTGCAGGGTGCAGAGGGTGCCATACAGATTGGCTCCTTCTATGCCAGCTTTCCCGAGTTAAGCTCCACAGATCTCTCTTCCCGTTCCGAATCATCACCATCCAAGAAAACCCACAGTACAACTATTCCTCATCAGAATCACAATAACAATACATTCTTGAAATCCCCACCCTCCTCTGCATGCAGCCAGACCTTAGATGTTGTCATGACAGAGAGCTCCGAGGCAGCATTGCTGCTCAAGAGAGCTCACAGCGAGGCGGCAGAGTTGCTGCAGCATGCATCCCTCCAATCACAAGAGGATACAAAGCATAATAGTTTCATCAGCAGCAGATCCAATAATAAGAGCCATCATCATCACTCTCAAGACAGAGACAAAGAAAGGGGTGCTTTCAGGGTCAAAGCTACTTTTGGGGACGAGAAGATCCGGTTCAGCATGCAGCCCAATTGGGGGTTCAGAGATCTACAGCTTGAGATGGCAAGGCGCTTCAACTTGAACGATATTAGCATCAGCAGCAGCAACATTGATCTCAAATACTTGGATGAAGATGGGGAGTGGGTTTTGTTGGCATGCGATGCAGATCTTGAGGAGTGCAAGGACATACACAGATCATCTCAGAGCAGAACCATCCGCCTCTCACTTTTTCAAGCTTCCCCCCTCAATCATCTAGCAACAAACACTTTTGGCAATGGCACCACCAGCCCCTCCTAG 2589 0.5299 MEYGGIVHNENGAFGSLSESAVEAEVDLVDELLVEGCWVETTSAGGCYNWMHNPSDAVVAPQPQYLEMLQLQLQEESSSSSSDQESLVGKRWWIGPTRPGPSSSSSSSSSVKERLVVAVGYLKDYTKNNNLLIQIWVPPRRSPLPLPLPLPLDVLTFPNPSPNPNPNLCVRFLRSHEYSHHYQAQQHYDLRGSIALPVFERGTATCLGVLDILITNHLNLTNNYRPQLDNVCNALEAVDFRSSHQNLNANFMPPAIKVYEELYQAALNEIVEVLTSVCKTQNLPLGLTWAPCIQQGKCGCGHSSAMCVSTVDTACYVGDLEMLGFQEACSEYHLFKGQGIVGTAFTSAKPCFAIDITAFSRAEYPLSHLANIFGLHAAVAIPLRSLYTGSADFVLEFFLPKDCHDTEQQKHMLNSLSMLVQQACRSLHVATEDDFTPPMLTHHQAQAQIMEEACSKDQSWIAHMMEAQVQQKGKGVCVSLEYQMEEPKEEFKVTTNWDTANDQAHHQLFSSSDFGHIDVLEHSRSRASTAVDGGEESYALGGRRSSSSGSGGRKSGDKRRTKAEKTISLPVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKVGHSLKKLQLVIDSVQGAEGAIQIGSFYASFPELSSTDLSSRSESSPSKKTHSTTIPHQNHNNNTFLKSPPSSACSQTLDVVMTESSEAALLLKRAHSEAAELLQHASLQSQEDTKHNSFISSRSNNKSHHHHSQDRDKERGAFRVKATFGDEKIRFSMQPNWGFRDLQLEMARRFNLNDISISSSNIDLKYLDEDGEWVLLACDADLEECKDIHRSSQSRTIRLSLFQASPLNHLATNTFGNGTTSPS* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0076 862 MobiDBLite consensus disorder prediction 651 684 - -
Ahy17g0076 862 CDD PB1_NLP 757 842 IPR034891 -
Ahy17g0076 862 Gene3D - 754 841 - -
Ahy17g0076 862 PANTHER PROTEIN NLP2 160 848 - -
Ahy17g0076 862 PANTHER PROTEIN NLP2 29 139 - -
Ahy17g0076 862 MobiDBLite consensus disorder prediction 524 564 - -
Ahy17g0076 862 MobiDBLite consensus disorder prediction 720 755 - -
Ahy17g0076 862 ProSiteProfiles RWP-RK domain profile. 553 634 IPR003035 -
Ahy17g0076 862 MobiDBLite consensus disorder prediction 720 738 - -
Ahy17g0076 862 SUPERFAMILY CAD & PB1 domains 745 845 - -
Ahy17g0076 862 Pfam PB1 domain 757 842 IPR000270 GO:0005515
Ahy17g0076 862 ProSiteProfiles PB1 domain profile. 756 843 IPR000270 GO:0005515
Ahy17g0076 862 SMART PB1_new 756 843 IPR000270 GO:0005515
Ahy17g0076 862 PANTHER PROTEIN NLP8 160 848 IPR045012 GO:0003700
Ahy17g0076 862 PANTHER PROTEIN NLP8 29 139 IPR045012 GO:0003700
Ahy17g0076 862 Pfam RWP-RK domain 567 614 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0076 Ahy-Chr17 996576 1000686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0076 11 862 NLP Transcription Factor Family AT4G35270 42.036 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy17g0076 PB1 4.40E-18 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0076 - - aip:107633985 1575.07