Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0062 ATGGATAACGAGGTGTTAGAATTTGATATTGGGCTGGAAGGAGGGGAGAGAGAATGCGAGGATGATGAGGGCGACATTGAGCACCCTATGGCTATGGCCATGGCTATCGAAGAGGATGAACTGGCTGATGCTGACAGAGGCAGAGGCACTGCCACTAGTGGTAGCGGTGGAGAAATTTACGTTCCTGAGGGTTTTGGTGCGGGTGACCTCTTAGATCTTGAACCTTACGAGGGCATGGAATTTGAGTCTGAGGAGGCTGCCAAGGCCTTCTACAATTCTTATGCCCGTCGTATCGGGTTCAGTACTCGGGTTAGCTCATCCCGGCGTTCCAGGCGCGATGGAGCCATCATACAGAGGCAATTTGTTTGTGCAAAGGAGGGTTTCCGCAACTTGAATGAGAAACGCACCAAGGATAGGGAGATCAAGCGTCCTCGAACCATTACCAGAGTCGGATGCAAAGCGGCTTTGTCGGTCAAAATGCACGACTCTGGCAAGTGGATCGTCTCTGGGTTTGTTAGGGAACACAACCACGAGCTTGTTCCACCGGATCAGGTGCACTGCCTTCGCTCTCACAGACAAATATCTGGAGCTGCCAAGACGCTAATTGATACTTTACAGGCTGCTGGAATGGGTCCTCGGAGAATTATGTCAGCACTGATCAAGGAGTGTGGTGGGATTAGCAAAGTTGGTTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATAGGCAGAGAAGTCTAGAAGGCGACATTCAGCTTGTTCTGGATTATTTGAGACAAATGCATGCCGAAAACCCTTGTTTCTTCTATGCTGTGCAAAGTGATGAGGACCAGTCCATGAGCAATGTTTTCTGGGCCGATCCCAAGGCAAGGTTGAATTACACTTTTTTTGGTGATACCGTAACCTTTGACACTACTTACCGGTCCAATAGGTATCGACTACCGTTCGCTCCCTTTACTGGTGTAAACCATCATGGACAACCTGTTCTCTTTGGTTGTGCTTTCCTAATAAATGAATCTGAAGCATCATTTGTATGGCTTTTCAAGACGTGGCTTATGGCTATGTCTGGACGCCCACCATTGTCAATAACAACCGATCATGATTCTGTAATTCGGTCAGCTGTACTACAAGTATTCCCTGAGACCCGCCACCGATTCTGCAAATGGCACATTTTTAAAAAATGCCAGGAGAAGTTATCTCACATTTTCCTCAAATATCCAAATTTCGAAGTTGAATTTCACAGATGTGTTAACTTGACGGAGTCAATTGAGGAATTTGAATCTTGCTGGTCAACACTCATCGATAGGTATGATCTGCGGGACCATGAATGGCTTCAAGCAATATATTCTGCTTGTAAGCAGTGGGTACCTGTATATTTGCGAGACACATTCTTTGCAGAAATGTCTATCACACAGCGAAGCGATGGCATGAACTCATACTTTGATGGGTATGTAAATGCTTCAACCAACTTAAATCAGTTCTTCAAGTTGTATGAGAAAGCACTGGATAGTCGCAATGAGAAAGAAGTCAGAGCAGATTATGACACAATGAATAGTTCACCAGTTTTGAAGACCCCATCCCCAATGGAGAAGCAAGCATCTGAGCTTTACACACGAAAGATTTTCATGAGGTTCCAAGAGGAGCTAGTTGGGACGCTAACATTCATGGCATCCAAAACCGAGGATGATGGGGAGGTCGTTACATATCATGTAGCTAAATTTGGAGAGGATCATAAGGCATACTATGTTAAATTCAATGTTTTAGAGATGAAAGCGAGTTGTAGTTGCCAAATGTTTGAATTTTCCGGCCTTGTTTGTAGACATGTTTTGGCAGTGTTTAGAGTAACCAATGTACTCACTCTACCCGCTCATTATATATTGAAACGTTGGACGAGAAATGCCAAAAGCAGTGTTACATTAGAAGAACATTCTTGTGATATATATTCTTACTATTTGGAATCTCATACAGTTAGATATAATACCCTCAGACACGTGGCCTTTAAGTTTGTTGATGAAGGAGCAAAGTCTCCTGAGACTTATGATGTTGCAATGGGTGCTTTACAAGAAGCCACAAAAAGAGTTGTTCAAGTAATGCAAAGTGAGGAACGAATTCTCATCAACAATGGCAAAGTTAGGAGTCACTTGCAAATTGATGAAAGTCATACTAATTCCAGAAGTGGACACGAGGAAGGAAACTTGGGCCAGCATATGTCCGAGGATGACATGGACAAGAGCATTAGAGAACTTATGAATGAGCTTGAGTTTGCAAATCGAAAGTGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCATAAGTTAGAGTTGTCAATTAAGGTGGAAAACATCAAGATAAGCATTAAAGATGGCCTCTAA 2394 0.4348 MDNEVLEFDIGLEGGERECEDDEGDIEHPMAMAMAIEEDELADADRGRGTATSGSGGEIYVPEGFGAGDLLDLEPYEGMEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKAALSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKECGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPCFFYAVQSDEDQSMSNVFWADPKARLNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRPPLSITTDHDSVIRSAVLQVFPETRHRFCKWHIFKKCQEKLSHIFLKYPNFEVEFHRCVNLTESIEEFESCWSTLIDRYDLRDHEWLQAIYSACKQWVPVYLRDTFFAEMSITQRSDGMNSYFDGYVNASTNLNQFFKLYEKALDSRNEKEVRADYDTMNSSPVLKTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKTEDDGEVVTYHVAKFGEDHKAYYVKFNVLEMKASCSCQMFEFSGLVCRHVLAVFRVTNVLTLPAHYILKRWTRNAKSSVTLEEHSCDIYSYYLESHTVRYNTLRHVAFKFVDEGAKSPETYDVAMGALQEATKRVVQVMQSEERILINNGKVRSHLQIDESHTNSRSGHEEGNLGQHMSEDDMDKSIRELMNELEFANRKCEIYRSNLLSVLKAVEDHKLELSIKVENIKISIKDGL* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0062 797 MobiDBLite consensus disorder prediction 720 740 - -
Ahy17g0062 797 Pfam MULE transposase domain 302 395 IPR018289 -
Ahy17g0062 797 Pfam FAR1 DNA-binding domain 90 181 IPR004330 -
Ahy17g0062 797 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Ahy17g0062 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 59 763 - -
Ahy17g0062 797 SMART 26again6 593 620 IPR006564 GO:0008270
Ahy17g0062 797 Coils Coil 740 767 - -
Ahy17g0062 797 Pfam SWIM zinc finger 570 616 IPR007527 GO:0008270
Ahy17g0062 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 763 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0062 Ahy-Chr17 803088 807221 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy17g0062 MULE 6.30E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0062 - - adu:107496170 1576.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0062 17 803088 807221 Ahy17g0650 17 6709485 6714770 PCT
Ahy17g0062 17 803088 807221 Ahy7g0506 7 4981347 4986469 PCT
Ahy17g0650 17 6709485 6714770 Ahy17g0062 17 803088 807221 PCT
Ahy7g0506 7 4981347 4986469 Ahy17g0062 17 803088 807221 PCT