Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0052 ATGGAAGAAGAAACAATGTATCCCTGCACTAACTGTGAAGAGTCTTTTGCAAGTAAAATCAAATTGGTTTCCCATTCAAAGCTGAAGCACAAAAAATGTGTTGTTGTTTGCGAACTGTGTGGAAACGGATTCAAAAATAACAAAAACCTTAAATTTCATCAGAATCAGTGTGTTTTTGTTCAAGAAGCCAGCTCAAGGCCCTTGCAAGAGCGCTTTATGTGCGTTCATTGCAAGGGTGGAGCGATTTTTAATCATCCAAACGAATTGAAGAGGCACGCTCGAAAGAAGCACGAGGACTGTAAATTTTCTTGCTGCTGTGGAAACCTATTCGAAAGCAAGAAGGAACGTGATCTCCATTTAAGAGAGTGCGTGCATTATCAAGGGGAAAACTAA 393 0.3995 MEEETMYPCTNCEESFASKIKLVSHSKLKHKKCVVVCELCGNGFKNNKNLKFHQNQCVFVQEASSRPLQERFMCVHCKGGAIFNHPNELKRHARKKHEDCKFSCCCGNLFESKKERDLHLRECVHYQGEN* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0052 130 SMART c2h2final6 72 97 IPR013087 -
Ahy17g0052 130 SMART c2h2final6 7 30 IPR013087 -
Ahy17g0052 130 SMART c2h2final6 35 55 IPR013087 -
Ahy17g0052 130 SUPERFAMILY beta-beta-alpha zinc fingers 3 53 IPR036236 -
Ahy17g0052 130 Gene3D Classic Zinc Finger 2 71 - -
Ahy17g0052 130 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 67 IPR013087 -
Ahy17g0052 130 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 30 IPR013087 -
Ahy17g0052 130 ProSitePatterns Zinc finger C2H2 type domain signature. 9 30 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy17g0052 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0052 - K09228 ahf:112766424 250.751