Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0014 ATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGGAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAACCCCAAAAATTCGCGAATGTTCACAAGATCTTCGGCGCGAGCAATGTCACCAAGCTTCTCAATGAGCTTCTGCCTCAGCAGAGGGAAGACGCAGTGAATTCCCTCGCATACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTACGGCTGCGTTGGCGCCATATCTTACCTTCAGAGACAAGTCCAGAGACTTCAGAAGGAACTTGATGCTGCCAACGCGGATCTTCTTCGCTACGCTTGCAACGAAATTCCTCCTCCACATCATCATGTCCCAACCCTAGCACCACCATTAACTCCCACAATTCATCATCAACTTACACAAAGGCACTTTGGTGGTGCAAGAATTGGCAATGATCATGGAATTGGATTTTATAGGCAATCTCCAACCACCTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCAGAAGGAGGAGGTAATTTATGA 570 0.4754 MASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPPHHHVPTLAPPLTPTIHHQLTQRHFGGARIGNDHGIGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0014 189 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Ahy17g0014 189 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Ahy17g0014 189 Coils Coil 89 116 - -
Ahy17g0014 189 PANTHER ELONGATED PETIOLULE 1 1 185 - -
Ahy17g0014 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0014 Ahy-Chr17 211228 213732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0014 1 113 AS2 family AT5G63090 93.860 5.47e-73 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy17g0014 LOB 3.80E-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0014 - - gmx:100799774 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1674 11 99884166 99894360 Ahy17g0014 17 211228 213732 PCT
Ahy17g0014 17 211228 213732 Ahy11g1674 11 99884166 99894360 PCT