LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy17g0002	ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGAAAGTGGTGGTGGTGGGTTGAAGAAGGAAGTGGCAAAAAAGGAATCTTTCAAGGAATCATCAGCTCCTCAGGTTCATCACCCCAGCAGGGTTAGCTCAGATAAATCAAAGTCACGTTGTAGCTCAGATCCTAAGAAGGAAACACCACTTCCGAAGGATGGGCCAACTGCTCATATTGCTGCTCAAACATTTACATTCCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCAGAATGTTTACTTGGGGAAGGAGGTTTTGGGCGCGTTTACAAGGGTCGGCTTGAGAACACAGGACAGGTAGTTGCTGTAAAGCAACTTGATCGAAATGGTCTTCAAGGGAATCGGGAGTTTTTGGTGGAGGTTCTCATGCTTAGTCTCTTACATCACCCTAATCTGGTGAACTTAATCGGTTATTGTGCTGATGGTGATCAGCGGCTCCTTGTTTATGAATTCATGCCATTGGGATCTTTGGAGGATCATTTACATGATCTCCCTCCTGACAAGGAGCCTCTGGACTGGAACACTAGGATGAAAATAGCAGCTGGTGCAGCAAAGGGATTGGAATATTTGCATGACAAGGCAAACCCCCCTGTGATATATAGAGACTTAAAATCTTCTAACATCCTTCTAGATGAGGGTTATCATCCCAAGTTATCGGATTTTGGACTAGCTAAACTTGGTCCTGTTGGTGACAAGACACATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCACCAGAATATGCTATGACTGGTCAACTCACTCTGAAGTCCGATGTTTACAGCTTTGGAGTTGTGTTCCTTGAACTTATTACGGGGCGCAAGGCTATTGACAATACACGTGCACATGGAGAGCATAATCTTGTTGCTTGGGCCCGGCCTCTTTTCAAAGATCGTAGAAAGTTCCCCAAAATGGCTGATCCTCTACTCCAAGGCCGATATCCAATGCGAGGACTGTACCAAGCATTGGCAGTTGCAGCAATGTGCTTGCAGGAACAAGCTGCCACAAGGCCTCTTATTGGGGATGTCGTAACTGCTCTCACATATCTGGCCTCCCAGACATATGAACCAAATGTAGCCAATCAGTCCAACAGACTCGGTCCATCGACCCCCCGGAGCAGGGATGACAGAAGGAGCATGATAGATGGTGTGGATAGCCCAGACCGGGGGCGTCTCGGCTCCCCTTCCACCCACAGAAACTCACCTGATTACAGGAGGAGAGACAATAGGGAACTGAGTGTTGGGACAGAGTTAGGCAGGAGTGTCTCTGGCAGTGGTGGGTCGGGGAGGAAATGGGGACTGGATGATTTAGAAAGGCAAGATTCTCGTAGAGACAGCCCTGTAAATACTGCAAGAGCTAGGGAGACTCCAAGGAACCGTGACCTAGACAGGGAACGCGCTGTTGCAGAAGCGAAAGTATGGGGTGAGAATTGGAGGGAAAAGAAGAGAGCAAATGCCATGGGAAGCTTTGATGCCACAAATGAGTGA	1539	0.4769	MGGCFPCFGSSNKEESGGGGLKKEVAKKESFKESSAPQVHHPSRVSSDKSKSRCSSDPKKETPLPKDGPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLENTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAHGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYEPNVANQSNRLGPSTPRSRDDRRSMIDGVDSPDRGRLGSPSTHRNSPDYRRRDNRELSVGTELGRSVSGSGGSGRKWGLDDLERQDSRRDSPVNTARARETPRNRDLDRERAVAEAKVWGENWREKKRANAMGSFDATNE*	513

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy17g0002	512	Pfam	Protein kinase domain	95	304	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy17g0002	512	ProSitePatterns	Protein kinases ATP-binding region signature.	96	119	IPR017441	GO:0005524
	Ahy17g0002	512	PANTHER	OS07G0668900 PROTEIN	1	506	-	-
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	387	402	-	-
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	1	70	-	-
	Ahy17g0002	512	ProSiteProfiles	Protein kinase domain profile.	90	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy17g0002	512	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	213	225	IPR008271	GO:0004672\|GO:0006468
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	449	483	-	-
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	417	431	-	-
	Ahy17g0002	512	CDD	STKc_IRAK	96	365	-	-
	Ahy17g0002	512	SMART	serkin_6	90	367	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	376	483	-	-
	Ahy17g0002	512	PANTHER	SERINE/THREONINE-PROTEIN KINASE PBL27	1	506	-	-
	Ahy17g0002	512	Gene3D	Phosphorylase Kinase; domain 1	74	166	-	-
	Ahy17g0002	512	Gene3D	Transferase(Phosphotransferase) domain 1	167	383	-	-
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	17	35	-	-
	Ahy17g0002	512	MobiDBLite	consensus disorder prediction	44	66	-	-
	Ahy17g0002	512	SUPERFAMILY	Protein kinase-like (PK-like)	72	364	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy17g0002	Ahy-Chr17	81645	88252	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy17g0002	70	369	Glycoside Hydrolase	AT3G07070	75.667	1.36e-169	483

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Ahy17g0002		Pkinase	4.80E-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy17g0002	-		-	adu:107468111	985.326