Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3676 ATGAAGCACAGGTTGTTCTTTATGCCATTTTCAATTATTGTGTGCATCATGATGATACTCATAGTAGAAGCAGATAACAATAATGATGGTTTTGTGAAAGCAAGAGGGATTCAGCTTGTGTTGAATGGAAACCCTTATTATGCAAATGGTTTCAATGCATATTGGCTAATGTTTGAAGCATCTGAACCTTCTCAAAGAAACAAAGTGTCTTCAGCATTTCAAGATGCTTCAAGCCTTGGACTTAACATTGCAAGAACTTGGGCTTTCAGTGATGGTGGCTATAAACCTCTTCAATACTCTCCTGGATCCTACAATGAAGACATGTTCCAAGGGTTGGATTTTGTAATATCAGAAGCGAAAAAATATGGGATGAAGCTTGTGTTGAGTTTGGTAAATAATTATGAGGACATGGGAGGGAAGAAACAATATGTTGAATGGGGAAGGAGTCAGGGCCAATCCATAAATTCTGAAGATGATTTCTACACAAACCCTGTTGTCAAGGGATACTATAAAAACCACATTAAGGGTTGGATTGAAGAGATGGCATCTTATGTGAAATCCATAGATGGAAATCACTTGCTTGAAGCTGGTCTTGAAGGTTTTTATGGGCAATCAAAGCAAGAGACTAACCCAAGCTTCCAAGCAGGAACAGATTTCATAGCAAATAATCAAATCCCTGAAATTGATTTTGCAACGGTTCACTCTTACCCTGACCAATGGCTATCAGGTTCAAGTTATGAAGATCAAATCTCATTCCTAAGTCATTGGCTTAATGAACATATACAAGATGCACAGAACACTCTTCACAAGCCAGTTCTCTTTGCTGAGTTTGGTATTTCAACAAAAACTTTTGGTTCTAACACAAAACCAAGGGACCAATTTTACAACACGGTATACTCCAAGATCTATTCGTCGGCAAGTGGTGGCGGCGCAGCTGTTGGTTGCTTGTTCTGGCAACTCCTTGACCAAGGAATGGATACTTTTCGCGACGGTTATGAGGTAGTTATTAGCGAAAGCCCCTCAACGGCTAGTTTGATTGCCCAAGAATCTCAAAAGATGAACCGGATTCGAAAAAAGTACTAA 1083 0.3943 MKHRLFFMPFSIIVCIMMILIVEADNNNDGFVKARGIQLVLNGNPYYANGFNAYWLMFEASEPSQRNKVSSAFQDASSLGLNIARTWAFSDGGYKPLQYSPGSYNEDMFQGLDFVISEAKKYGMKLVLSLVNNYEDMGGKKQYVEWGRSQGQSINSEDDFYTNPVVKGYYKNHIKGWIEEMASYVKSIDGNHLLEAGLEGFYGQSKQETNPSFQAGTDFIANNQIPEIDFATVHSYPDQWLSGSSYEDQISFLSHWLNEHIQDAQNTLHKPVLFAEFGISTKTFGSNTKPRDQFYNTVYSKIYSSASGGGAAVGCLFWQLLDQGMDTFRDGYEVVISESPSTASLIAQESQKMNRIRKKY* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3676 360 SUPERFAMILY (Trans)glycosidases 31 343 IPR017853 -
Ahy16g3676 360 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 11 175 - -
Ahy16g3676 360 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 174 360 - -
Ahy16g3676 360 Gene3D Glycosidases 27 175 - -
Ahy16g3676 360 Gene3D Glycosidases 176 357 - -
Ahy16g3676 360 PANTHER - 174 360 IPR045053 GO:0004553
Ahy16g3676 360 PANTHER - 11 175 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3676 Ahy-Chr16 154688298 154693729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3676 5 360 Glycoside Hydrolase AT5G66460 54.613 4.03e-151 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3676 K19355 - gmx:100794126 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3676 16 154688298 154693729 Ahy16g3676 16 154688298 154693729 ECH
Ahy16g3676 16 154688298 154693729 Ahy6g2923 6 115384293 115389724 hybridization
Ahy16g3676 16 154688298 154693729 Ahy17g2376 17 114336016 114338777 PCT
Ahy16g3676 16 154688298 154693729 Ahy8g0050 8 805190 808007 PCT
Ahy17g2376 17 114336016 114338777 Ahy16g3676 16 154688298 154693729 PCT
Ahy8g0050 8 805190 808007 Ahy16g3676 16 154688298 154693729 PCT