Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3624 ATGTACAATTATAAATTGAAGTCCCTTTGGCCCTCAATTTTTCATTCTCATTATTATCACTTCAACACTCTTCTTTGCTTCACTTTCCTTCCCCTTCCTATTTCTCTGTACTACTTTTCTGTCAAAGCCATGGCCCTAACCTCATTAAGCTCAAAGTCTTGTGCAACCTTCTGGCTTTTCCTCCTCTTAGGTAATGTAGCATCAGCTACATTGTTTACCCTACATAACAATTGCAAATACACTGTTTGGCCTGGAACACTTTCCGGCAATGACCCGACCATTCTTGACACCGGTCTTTCTCTAACATCCGGTTCTTTGGTCCAGATGACCGCCCCAGTTGGCTGGTCAGGACGATTCTGGGGTAGAACCGGATGTAACTTTGATATGGCTGGTAATGGCAAATGTGCCACCGGAGATTGTCCCGGTGGACTCAAGTGCACTGGTGGAGGCGTTCCACCAGTGACACTAGTAGAATTCACCATCGGAAGTGCAACCAATGGCAACAAAGATTTTTATGACGTAAGCTTGGTGGATGGTTACAATGTGGCCATTGGAGTACGGGCAACCGGAGGAACCGGTAATTGTCAATACGCAGGTTGCGAAAATGACCTGAATGGTTACTGCCCAAAGGAGTTGCAAGTAAAAGATGATACGGGTTCGGTAGTAGCATGTAAGAGCGCGTGTGTGGCGTTTAACACCCCGGAGTATTGTTGCACCGGGGAGCACTCAACGCCACAAACGTGCTCACCTACGAATTACTCAAAGATGTTTAAGAATGCATGTCCAAGAGCTTATAGTTACGCTTATGATGATGCTTCAAGCACTTTTACATGCTCAGGTGCAAATTACACCATCACTTTTTGCCCCGCAGGATCATCTTAG 882 0.4569 MYNYKLKSLWPSIFHSHYYHFNTLLCFTFLPLPISLYYFSVKAMALTSLSSKSCATFWLFLLLGNVASATLFTLHNNCKYTVWPGTLSGNDPTILDTGLSLTSGSLVQMTAPVGWSGRFWGRTGCNFDMAGNGKCATGDCPGGLKCTGGGVPPVTLVEFTIGSATNGNKDFYDVSLVDGYNVAIGVRATGGTGNCQYAGCENDLNGYCPKELQVKDDTGSVVACKSACVAFNTPEYCCTGEHSTPQTCSPTNYSKMFKNACPRAYSYAYDDASSTFTCSGANYTITFCPAGSS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3624 293 CDD TLP-PA 72 288 - -
Ahy16g3624 293 PRINTS Pathogenesis-related protein signature 71 83 IPR001938 -
Ahy16g3624 293 PRINTS Pathogenesis-related protein signature 131 160 IPR001938 -
Ahy16g3624 293 PRINTS Pathogenesis-related protein signature 279 288 IPR001938 -
Ahy16g3624 293 PRINTS Pathogenesis-related protein signature 118 129 IPR001938 -
Ahy16g3624 293 Gene3D Thaumatin 70 289 IPR037176 -
Ahy16g3624 293 PIRSF PR5 21 293 IPR001938 -
Ahy16g3624 293 Pfam Thaumatin family 76 289 IPR001938 -
Ahy16g3624 293 SMART tha2 72 289 IPR001938 -
Ahy16g3624 293 PANTHER OS03G0233200 PROTEIN 57 290 IPR001938 -
Ahy16g3624 293 ProSitePatterns Thaumatin family signature. 131 146 IPR017949 -
Ahy16g3624 293 SUPERFAMILY Osmotin, thaumatin-like protein 71 290 IPR037176 -
Ahy16g3624 293 ProSiteProfiles Thaumatin family profile. 69 289 IPR001938 -
Ahy16g3624 293 PANTHER PATHOGENESIS-RELATED PROTEIN 5-RELATED 57 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3624 Ahy-Chr16 154075039 154076406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3624 72 289 Receptor kinase-like Gene Family AT5G38280 48.230 1.15e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3624 - - adu:107495975 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3624 16 154075039 154076406 Ahy6g2870 6 114771034 114772401 hybridization