Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3621 ATGGATGTTTGCAGCCCTCTTAAATCCGACACTAAACTAAAGCACCAACCTCTGACCCCTCTTAGGTTGTTAAGGGGTCTGTTATGTTTAGTGGTGTTTCTTTCCACAGCTTTTATGTTCTTAGTCTATTTTGCACCAGTGGCAGTTGTAGCGTTGAGGCCTTTCAGCACACATTTTAGTAGGAAAACAGTGTCATTCATCTTTTCGCTTTGGTTAGCTCTGTGGCCCTTCCTATTTGAAAATAACAAAACTAAAGTCGTCTTTTCCGGTGATAGTGTTCCGTCAAAGGAACGTGTTTTACTGATTGCTAATCACAGAACTGAGGTTGATTGGATGTACTTGTGGAATCTTGCACTTCGTAAGGGAAGACTCGGATGCATAAAATACATCCTTAAAAGCAGCTTGATGAAATTGCCTATCTTTGGTTGGGGATTTCACATTCTGGAGTTCATTGCAGTGGAGAGGAAGTGGGAGATAGATGAGAAAATACTGCACCACAAGCTTTCGACACTAAAGGATCGTCAAGATCCTTTATGGCTAGCTCTTTTTCCAGAAGGAACCGATTATACTGAACAGAAGAGTCAAAATAGTCAAAAATATGCTTCTGAAGTTGGGCTACCTGTGCTGAAAAATGTGTTGCTGCCAAAAACAAAAGGGTTTCATGCTTGCTTGGAAGCTCTACGAGGCTCATTGGACGCAGTGTATGATGTGACCATTGCGTATAAAAATCAATGTCCAACTTTTCTGGACAATGTCTTCGGTGTGGATCCGTCTGAAGTCCACCTACATGTTTTGCGGATTCCAGTGGATGGGATTCCAGCTTGTGAAACTGAAGCTGCTTCATGGCTAATGAACGCATTCCAGAAGAAGGATCAATTGCTCTCTGATTTCAAGGTTCAGGGTCACTTCCCTAACCAAATAAATGAAAAGCAACTTTCAACATCCAAGTGCATCGTTACTTATACTTTGGTGGTTGCTTTCACTGCCCTGTTCACATATTTCACCTTTTTCTCTCACATTTTGTTCAAGTTATACGTAGGTCTATCATGTGCATATCTGGCTATTTCAACGCGCTATGATTTTCAATTGATGCCTTTTACATTCTATGTTAATGCACTCTTTAACAGCAAGAAGCAAAAGAGTGGATAA 1149 0.4091 MDVCSPLKSDTKLKHQPLTPLRLLRGLLCLVVFLSTAFMFLVYFAPVAVVALRPFSTHFSRKTVSFIFSLWLALWPFLFENNKTKVVFSGDSVPSKERVLLIANHRTEVDWMYLWNLALRKGRLGCIKYILKSSLMKLPIFGWGFHILEFIAVERKWEIDEKILHHKLSTLKDRQDPLWLALFPEGTDYTEQKSQNSQKYASEVGLPVLKNVLLPKTKGFHACLEALRGSLDAVYDVTIAYKNQCPTFLDNVFGVDPSEVHLHVLRIPVDGIPACETEAASWLMNAFQKKDQLLSDFKVQGHFPNQINEKQLSTSKCIVTYTLVVAFTALFTYFTFFSHILFKLYVGLSCAYLAISTRYDFQLMPFTFYVNALFNSKKQKSG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3621 382 Pfam Acyltransferase C-terminus 253 311 IPR032098 -
Ahy16g3621 382 SMART plsc_2 99 221 IPR002123 GO:0016746
Ahy16g3621 382 CDD LPLAT_LCLAT1-like 76 264 - -
Ahy16g3621 382 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 378 - -
Ahy16g3621 382 Pfam Acyltransferase 88 242 IPR002123 GO:0016746
Ahy16g3621 382 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 378 - -
Ahy16g3621 382 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 36 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3621 Ahy-Chr16 154042471 154044242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3621 1 368 Miscellaneous Gene Families AT1G75020 65.583 8.75e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3621 K13513 - gmx:100784146 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3621 16 154042471 154044242 Ahy6g2867 6 114738466 114740237 hybridization