Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3610 TTAAGTAGTAGGAAGAAAATTCTTTACAATGATATAAGTACTAGTTCAACTACTTCAGATTCAGGTGGTAGTAGTTGTGGAAGTGCAAGTGACTTAAGCCATGAAAACAACAACAACAACCTCAACCTTCTTCATCATGAACCTACATTGACCTTAGATTTGAATAACTACCATTATCATCATCAAGGACTTTCTAGAAGCTTCAATAATCACCACCATTTCCAACCTGAAATCTATGGTCGCAAGTTCAAGAGAAGCTCCAGGGTCATTAATGGAGTCAAGAGGAGCGTGAGAGCACCTAGGATGAGATGGACAACAACCCTCCATGCCCATTTTGCTCATGCTGTTCAACTCCTTGGTGGCCATGAAAGGGCAACACCAAAGTCAGTTTTAGAGTTAATGAATGTTAAGGATCTAACTCTAGCACACGTCAAAAGTCAGTTACAGGTATATATGTGTGTTTGGCCTTCACTATTCCCATATCTCCATTGCCTATCTCCATTGTTTTTCTTTCTTTCTTTCTTATTATATGTATCCTTATTTTTCCTCTTTTTGATTTTCAAATTTAGACACAAATGA 579 0.3765 LSSRKKILYNDISTSSTTSDSGGSSCGSASDLSHENNNNNLNLLHHEPTLTLDLNNYHYHHQGLSRSFNNHHHFQPEIYGRKFKRSSRVINGVKRSVRAPRMRWTTTLHAHFAHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSQLQVYMCVWPSLFPYLHCLSPLFFFLSFLLYVSLFFLFLIFKFRHK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3610 192 Gene3D - 99 153 - -
Ahy16g3610 192 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 2 154 - -
Ahy16g3610 192 SUPERFAMILY Homeodomain-like 97 153 IPR009057 -
Ahy16g3610 192 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 151 IPR006447 GO:0003677
Ahy16g3610 192 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 2 154 IPR044847 GO:0000976|GO:0006355|GO:0010158
Ahy16g3610 192 MobiDBLite consensus disorder prediction 13 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3610 Ahy-Chr16 153789479 153790291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3610 64 154 G2-like Transcription Factor Family AT5G42630 75.000 5.81e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy16g3610 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3610 - - ahf:112757924 343.584