Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3609 ATGAACTCTAATCCCAAAAAATCACAACCACCATTATCACCACTCTCATTACTAATTCTCACCCTCTCCTTGTTCTTATTATTGCTACCATGTACATCCTCAACAAACGCCAATTTCCAACACCAATTCAAAGAAGCACCTCAATTCTACAATTCCCCAAATTGCCCCTCCATTGAAGACAATAACTACATATGCTCTGATGAACTAGTTCATGTTGCAATGACACTAGACAAGACATACATACGAGGTTCCATGGCAGCAATCCTAAGTGTCCTTCAACACTCTTCATGTCCACAAAACATCTTCTTCCATTTTGTTTCTTCAACAAAATCCAACTCATCCTCACTCTTACACACCACACTCTCAAAATCATTCCCATACCTCAAATTCAAACTCTATGATTTCAGCGACGAATTAGTCTCTGGCCTGATTTCAACGTCAATTCGCTCCGCCCTCGATTGCCCTCTAAACTACGCAAGATCCTACCTCCCAACCATTCTCCCAACATGCGTGAAAAAGATAGTCTACCTCGACTCCGACCTCGTACTAGTCGATGAAATTACGAAACTAGCCTCCACCCCATTAAACAAGGATCAAGTTCTTGCAGCACCGGAATACTGCAATGCAAACTTCACAGCTTACTTCACTCCCACGTTTTGGTCCAACCCTTCGCTTTCGCTAACGTTTGCGAATCGAAAAGCTTGTTACTTCAACACTGGGGTGATGGTGATTGATCTTGAGAAATGGCGGGAAGGAGATTACACACGGAAGATAGAGGAATGGATGGAGCTTCAGAAGAGGATGAGAATCTACGAGCTTGGATCGTTGCCGCCATTTTTGCTGGTTTTCGCGGGGAAGATCGGAAGTGTGGATCATCGGTGGAACCAGCATGGGCTTGGTGGAGATAACTTTAGAGGTTTGTGTAGAGATCTTCATCCTGGGCCTGTGAGTTTGTTGCATTGGAGTGGGAAAGGGAAGCCATGGGTGAGACTTGATGCTAATAGACCTTGTCCTTTGGATACTCTTTGGGCACCTTATGATCTTTTGATCACTCCTTTTTCTTTGGATTCTTGA 1074 0.4385 MNSNPKKSQPPLSPLSLLILTLSLFLLLLPCTSSTNANFQHQFKEAPQFYNSPNCPSIEDNNYICSDELVHVAMTLDKTYIRGSMAAILSVLQHSSCPQNIFFHFVSSTKSNSSSLLHTTLSKSFPYLKFKLYDFSDELVSGLISTSIRSALDCPLNYARSYLPTILPTCVKKIVYLDSDLVLVDEITKLASTPLNKDQVLAAPEYCNANFTAYFTPTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWREGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGKIGSVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDTLWAPYDLLITPFSLDS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3609 357 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 71 337 IPR029044 -
Ahy16g3609 357 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 1-RELATED 17 357 - -
Ahy16g3609 357 Pfam Glycosyl transferase family 8 71 330 IPR002495 GO:0016757
Ahy16g3609 357 SUPERFAMILY Nucleotide-diphospho-sugar transferases 70 348 IPR029044 -
Ahy16g3609 357 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 17 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3609 Ahy-Chr16 153776134 153778030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3609 23 355 Glycosyltransferase AT3G50760 71.091 1.20e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3609 K20893 - gmx:100802240 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3609 16 153776134 153778030 Ahy16g3609 16 153776134 153778030 ECH
Ahy16g3609 16 153776134 153778030 Ahy6g2855 6 114472129 114474025 hybridization
Ahy16g3609 16 153776134 153778030 Ahy17g2428 17 116182122 116184117 PCT
Ahy16g3609 16 153776134 153778030 Ahy8g2813 8 51644338 51646349 PCT
Ahy17g2428 17 116182122 116184117 Ahy16g3609 16 153776134 153778030 PCT
Ahy8g2813 8 51644338 51646349 Ahy16g3609 16 153776134 153778030 PCT