Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3605 ATGCGACGAGAACAAGTCCAGCCCGCTTGCCATTCAGATTTTGAGCCAGATAGATTGAGTTGCTTACCTGGTCATGTTATAGACCAAATTCTTTCGCATTTGCCCCTTCGGGAAGCAGTGAGAACAAGTGTGTTATCAAGCAAATGGAGGTACAAATGGGCAACGCTACCAAATCTTGTGTTTGATAACCAATGTCACTCGGTAGCTTCCCAAGATCATTCAGATATCAAGAACAAGCTTTTGAGAATCATCGATCACGTACTTTTACTTCATGCTGGGGCAATCAACAAGTTCAAGCTCTCCCATCGCGATCTCATTGGTGTGACTGATATTGATCGTTGGTCACTTCATCTAACCAGAAGGTCTGTCAAGGAGTTTGTGCTGGAAATCTGGAAAGGGCAGCGCTATAAGATACCATCGTGCTTATTTACTTGTCAAAGTTTAGTTCATTTAGAATTGTTTAATTGTTGGCTTAAGCCTCCATCGACATTTCAAGGCTTTAAGAACTTGAAGAGTCTTGATCTGCAGCATGTTACCTTGGCTCAAGATGTGTTTGAAAACTTAATATCTAGCTGCCCCATGCTGGAACGATTAACGTTGATGAACTTTGATGGTTTCGCTAATCTCAACATTGATGCACCTAATCTTCAATTTTTCGACATTGGAGGCAAATTTGAAGATATCAGCTTCGAGAACACTTTCCAGTTATCTGTAGTATCCATTGGTTTGTATTTAAACTTTGAAACCAATCAAAATAGATTGCGTGGCAGTTCAAGCAATTTGCTCAAGTTTTTTGTTCATCTCCCTCATGTTCGAAGGCTAGAGGTTCAAAGCTATTTCTTAAAGTATTTGGCAATAGGGGCTGTGCCGCTAAAGCTTCCAAGACCATGCATTGATCTTAGTTACCTCTCCATTCGTATGAACTTCGATGATTCAAAGGAAATTTCAACTGCTTTATGCCTGCTAAGAAGCTCTCCTAATCTGCAAGAACTAGAAGTATTGGCTCGCCCTGACGAGCAGAATGTCCTGATACACCCTTATTGCGGGGAAGATGAATATTGTAGTTGTCCTATCATGCAATTGCGACATGTGAGGATAGATGGTGTCTCTGGTACCAAACCCGAATTAGATTTTATCAGTTTTCTGCTTCTGTATTCGCCGGTGCTAGAAAGGATGACTGTGAAGCCGGTTTCAAGTGGAGTGACTGAGTTGATGAAAGAGTTATTAAGGTTCAGGAGAGCTTCAGGGCGAGCTGAAATCATTTACCAAGAATCTCCTTGA 1281 0.4137 MRREQVQPACHSDFEPDRLSCLPGHVIDQILSHLPLREAVRTSVLSSKWRYKWATLPNLVFDNQCHSVASQDHSDIKNKLLRIIDHVLLLHAGAINKFKLSHRDLIGVTDIDRWSLHLTRRSVKEFVLEIWKGQRYKIPSCLFTCQSLVHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPMLERLTLMNFDGFANLNIDAPNLQFFDIGGKFEDISFENTFQLSVVSIGLYLNFETNQNRLRGSSSNLLKFFVHLPHVRRLEVQSYFLKYLAIGAVPLKLPRPCIDLSYLSIRMNFDDSKEISTALCLLRSSPNLQELEVLARPDEQNVLIHPYCGEDEYCSCPIMQLRHVRIDGVSGTKPELDFISFLLLYSPVLERMTVKPVSSGVTELMKELLRFRRASGRAEIIYQESP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3605 426 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 392 - -
Ahy16g3605 426 SUPERFAMILY RNI-like 116 333 - -
Ahy16g3605 426 ProSiteProfiles F-box domain profile. 16 50 IPR001810 GO:0005515
Ahy16g3605 426 Gene3D Ribonuclease Inhibitor 98 410 IPR032675 -
Ahy16g3605 426 SMART 9598neu4hmm 355 423 IPR006566 -
Ahy16g3605 426 Pfam F-box domain 19 51 IPR001810 GO:0005515
Ahy16g3605 426 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Ahy16g3605 426 PANTHER F-BOX PROTEIN-LIKE 13 392 - -
Ahy16g3605 426 SUPERFAMILY F-box domain 16 61 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3605 Ahy-Chr16 153723562 153726321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3605 17 217 EF-hand Containing Proteins AT5G41840 26.724 1.37e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3605 - - gmx:100782183 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3605 16 153723562 153726321 Ahy16g3605 16 153723562 153726321 ECH
Ahy16g3605 16 153723562 153726321 Ahy6g2850 6 114419557 114422316 hybridization