Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3588 ATGACGATGGAAGCATTATTCATCCTGCTTCTGCTTCTCAATTTCAATCTCATCAACATCGGAATTAGCCACCGTGACCCTGTTCAATGTCCCGTTCGTCTGTACTGTACAAAAAACGAAACCAATATTCTTGAGCTCCCTGGAGTTTCATCCTCGGTAAAACTCCCCGTCCGTCACATTAATTTCAAATCCAAAACTCTAGAAGTGTATGCTGCCGGAATCTGTTTGTCGGAACTCTTTCTCAAACTCAATTATTCATCATTCGATCCTTTCCGATTCATTCGAAGAGATTTTGGTTACTCTGCCCCTGGTTATGATGAAAACTATCCACTTAAACCCACCAACATTACTTTCTTCCATTGTCCTTCTTCAAATAGTGAGTACACGAGGTTACCTTGCCGGATTCAAGCGGCCGACGATGACGACGGCGTTGTCCGCACGAATCTTGTGCGCTGCAGAAAACTGTCCCATCAGGTTCTACCAATGCACGCCGAATTTATAAGGGATTTTTCATTCTACTTGGTGTGGTCGGAAACGAATTTCCATAGTGGATGCTTCGTTGGTTGCAAGATGCCCAAGGGGACACAATACTATGAATCAATTATTTTACCCGTTATAGGTGCAGCTCTCCTGTTCTCAACACTGGCTGCCTTGTATTATATATATTGCTATTATAGAAACAAAGGGGAAGATCAACAAAGAGTTGCAACTTTTTTGAAGGACTATGAGGCATTAAACCCAACAAGATTCTCTTATGCTGATATCAAGAGAATTACTAAGCAGTTTAAGGACAAGTTAGGTGAAGGAGCTCATGGAGCTGTCTACAAAGGTAAATTGTCCAATCAAATTCTTGTTGCTGTCAAGATTCTCAATAATGCAGACGGAGATGGGACAGAGTTCATAAATGAAGTAGGAACAATGGCCAAAATCCACCATGTTAACGTTGTTCGCTTGCTTGGATATTGTGCTGATGGATCTCACCGCGCTTTAGTTTATCACTTCTTCCCCAATGGTAATCTCCAGAGCTTAATCGCTTCGTCCAGCAACAAAGAAACCTTCCTTGGATGGAACAAGTTGCATCAGATTGCTCTTGGCATAGCCAAAGGGATTGAATATCTTCACCAAGGCTGTGATCAGAGAATTCTGCATTTTGATATTAATCCTTACAATGTCCTGTTAGATGAAAGTTTCACTCCAAAAATTTCAGACTTCGGTTTAGCTAAGTTATGCTCCAAAAATCGAAGTACTGTATCCATGACTGCAGCTAGGGGAACCTTAGGCTACATGGCGCCTGAAGTTTTCTCTAGAAATTTCGGCAATGTATCTTATAAATCCGATATCTACAGTTATGGGATGTTATTGCTTGAGATGGTTGGAGGAAGAAAAAATACAAATGCTAGTCAAGAAACATTTCAAGTTCTATATCCCAATTGGATACATAATTTGCTTGAAGGAGATGATACATATATTCCTATTGATGATGATGGAGATTTTAGAATTGCAAAGAAACTTGCAATAGTGGGACTATGGTGCATCCAGTGGCACCCGGTTCACCGTCCCTCCATGAAAAGTGTAGTTCAAATGCTTGAAGGAGAGGAAAGCAAGTTGAAAGTGCCTCCGAATCCTTTTGAATCTGCAGGTGCGACTAGTTCAAGTGCAATTATTCCAGCAAGACGTCTGAATTTGGAATTGGAAGTAATCCCAGAAACAGACTAG 1716 0.4103 MTMEALFILLLLLNFNLINIGISHRDPVQCPVRLYCTKNETNILELPGVSSSVKLPVRHINFKSKTLEVYAAGICLSELFLKLNYSSFDPFRFIRRDFGYSAPGYDENYPLKPTNITFFHCPSSNSEYTRLPCRIQAADDDDGVVRTNLVRCRKLSHQVLPMHAEFIRDFSFYLVWSETNFHSGCFVGCKMPKGTQYYESIILPVIGAALLFSTLAALYYIYCYYRNKGEDQQRVATFLKDYEALNPTRFSYADIKRITKQFKDKLGEGAHGAVYKGKLSNQILVAVKILNNADGDGTEFINEVGTMAKIHHVNVVRLLGYCADGSHRALVYHFFPNGNLQSLIASSSNKETFLGWNKLHQIALGIAKGIEYLHQGCDQRILHFDINPYNVLLDESFTPKISDFGLAKLCSKNRSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNASQETFQVLYPNWIHNLLEGDDTYIPIDDDGDFRIAKKLAIVGLWCIQWHPVHRPSMKSVVQMLEGEESKLKVPPNPFESAGATSSSAIIPARRLNLELEVIPETD* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3588 571 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 27 570 - -
Ahy16g3588 571 ProSiteProfiles Protein kinase domain profile. 260 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3588 571 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Ahy16g3588 571 Gene3D Phosphorylase Kinase; domain 1 234 334 - -
Ahy16g3588 571 Gene3D Transferase(Phosphotransferase) domain 1 335 540 - -
Ahy16g3588 571 SUPERFAMILY Protein kinase-like (PK-like) 242 530 IPR011009 -
Ahy16g3588 571 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 570 IPR045874 GO:0004672
Ahy16g3588 571 Pfam Protein kinase domain 262 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3588 Ahy-Chr16 153488957 153491309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3588 222 542 Receptor kinase-like Gene Family AT1G66980 48.328 4.09e-99 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy16g3588 Pkinase 4.80E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3588 - - adu:110273083 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3588 16 153488957 153491309 Ahy16g3588 16 153488957 153491309 ECH
Ahy16g3588 16 153488957 153491309 Ahy6g2350 6 107117156 107125668 hybridization