Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3585 ATGCAAAGACAGTTTTGCCCTTACCACATGGTCTATACTCCATGGTGTTCAACAAATTTGTTTAGCATCTCAATTCTCACACATACATCAATCATGGTGAGCAGAGGAAAAGCCCTCTTCTGCTCATCATTACTCTTATTGCAACAAATTTTAACTTGCGCAGCGAATCAGAAGGATAACGGAGAAGCATGTAGGCCTTCCTCTTGCGGCAAAATCAGCAACGTAAAACATCCTTTCCGGCTGAAGGATGATCCCGCAACCTGTGGGGATCCGAGGTATGAGTTGTCTTGTGAGAATAACAGGACGCTGTTATATCTTTTTCCCGGTAAAACTTACCAAGTTGAGGCAATAAACTACAGCAACTTCACGATCCGGCTTGTAGATCCCGGCATCTCAGAGAATGACTGTTCTACCCTTCCTCGCTATTCTTTATCCCGTTCCAATTTCAGTGACAGTTACGTACCCAACTTCCTGCTCTCCAAAGGCGTCAATGAACCATACGGAACCCTTCAAGATCGAGTTTTTGTTAATGGCTCGACAACGGAGGAAGTCGGAATAAGAGTATTCGAGCACGTGATTTTCTTGAACTGCAGCAATCCGATCAAGGACGATCCACGATTCGTGGACACTGCCCCTTGCATTGAAAAAGGTGATCATGATGTTTATGCTGTCGTTGGAGGATTGAAGGCGGTTGAATTAAGAGATGATTGCCGTGTGAAGATGGTTGCTGCCTCATCCTTTCTTGCTCCCGCACAGCGAAACTTGTCATACGGTGAAATTCATAGGAGGCTCAGCTACGGGTTTGATCTTTCTTGGATGCTGGGCGGTGCTTGTGCATCTACTTGTGGGAAGCTCAATTATTGCTCATTCAACGAAACCGCTCAACGACTCATTTGCACGGAAGGCTGTGGCAGTCCGACGGGCGTCCAATGCAGAAAAATTTCAAAGTTCCAAATCATTGCAAAAGATTTTGCATATGGAATTTTGAAAGGATTTCGCAAAGTGGTAGGCAAAGATACTGGTGAAAATTTCTCTAAAATGGATGTGTTAGCTGTTATTAAGATAGGAGTATTCACAGGAAGATTTCTAGTGCCTTACATAGTCGTCAAACACACATTGGGTGTCATATTTTTTTCTGCACTTCTCATCTACACATTCCGAAGAAGACATATATCAATTTATGGGAACATTGAAGATTTTTTGCAAGGAAACACCTTCATGCCAATAAGATATTCATATAAAGAGATAAAGAAGATGACAAGAAATTTTAAGGAAAAGTTGGGAGAAGGAGGATTTGGTACAGTGTACAAAGGAAAGTTAATAAGCGGGCCTTCTGTAGCCGTAAAAATGTTAGGTAAAGCCAATGGTAACGGGCAAGATTTTATTAGTGAAGTTGCTACAATTGGTAGAATACATCATACCAATGTGGTGAGGCTGATTGGTTTTAATGTCGAGAGATCAAAACATGCTCTGGTATATGAATTCATGCAGAATGGTTCTTTGGATAAATATATCTTCTCTAAAGAGGATAGAATATCTTTAACTTATCAGAAGATGTTTGAGATAGCTCTAGGAGTAGCTCGTGGTATGGCTTATTTGCATGAAGGTTGTGACATGCAGATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCTGACTTTGGTCTCGCAAAACTATATCCTCTTGATAATAGTATTGTAACTTTGACTGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAACTGTTCTACCAAAATATTGGAGCAGTATCTTACAAGGCTGATGTCTATAGTTTTGGAATGCTTTTGATGGAAATAGCAAGTCAAAGAAGAAATTCGAATCCACATGCAGAGCATTCAAGTCAACTTTATTTTCCATTTTGGATATATGATCAGTTGGTTGCTGAGGAAAATGATGAGATTGAGATGGAAACTTTGATGGATGAAGAAAGGAGTGAGTTAGCAAAAAAGATGTTTATAATTGCGTTGTGGTGCATACAACTGAAGCCAAGTGATCGTCCCTCAATGAGTAAAGTAGTGGAAATGTTAGAAGGAGATGTTGCAAGTATTGAAATGCCTCCAAAACCTTCATATTGTCCAAATGATGTGATTCAAAGAGATTCTGAAGTTGACTCGTCAGGAGTAGATGCTTCAAATAATTCTTATGTATCTTCAAGTTTTGAGGAGGAAAGTACATCCAATCCCTTGTTAAAGTTTTCTGCTTGA 2259 0.4011 MQRQFCPYHMVYTPWCSTNLFSISILTHTSIMVSRGKALFCSSLLLLQQILTCAANQKDNGEACRPSSCGKISNVKHPFRLKDDPATCGDPRYELSCENNRTLLYLFPGKTYQVEAINYSNFTIRLVDPGISENDCSTLPRYSLSRSNFSDSYVPNFLLSKGVNEPYGTLQDRVFVNGSTTEEVGIRVFEHVIFLNCSNPIKDDPRFVDTAPCIEKGDHDVYAVVGGLKAVELRDDCRVKMVAASSFLAPAQRNLSYGEIHRRLSYGFDLSWMLGGACASTCGKLNYCSFNETAQRLICTEGCGSPTGVQCRKISKFQIIAKDFAYGILKGFRKVVGKDTGENFSKMDVLAVIKIGVFTGRFLVPYIVVKHTLGVIFFSALLIYTFRRRHISIYGNIEDFLQGNTFMPIRYSYKEIKKMTRNFKEKLGEGGFGTVYKGKLISGPSVAVKMLGKANGNGQDFISEVATIGRIHHTNVVRLIGFNVERSKHALVYEFMQNGSLDKYIFSKEDRISLTYQKMFEIALGVARGMAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPLDNSIVTLTAARGTIGYMAPELFYQNIGAVSYKADVYSFGMLLMEIASQRRNSNPHAEHSSQLYFPFWIYDQLVAEENDEIEMETLMDEERSELAKKMFIIALWCIQLKPSDRPSMSKVVEMLEGDVASIEMPPKPSYCPNDVIQRDSEVDSSGVDASNNSYVSSSFEEESTSNPLLKFSA* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3585 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Ahy16g3585 752 ProSiteProfiles Protein kinase domain profile. 421 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3585 752 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3585 752 MobiDBLite consensus disorder prediction 717 752 - -
Ahy16g3585 752 PANTHER RUST RESISTANCE KINASE LR10-RELATED 39 723 IPR045874 GO:0004672
Ahy16g3585 752 Pfam Protein tyrosine and serine/threonine kinase 423 694 IPR001245 GO:0004672|GO:0006468
Ahy16g3585 752 Gene3D Transferase(Phosphotransferase) domain 1 496 703 - -
Ahy16g3585 752 Gene3D Phosphorylase Kinase; domain 1 400 495 - -
Ahy16g3585 752 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 39 723 - -
Ahy16g3585 752 MobiDBLite consensus disorder prediction 705 752 - -
Ahy16g3585 752 Pfam Wall-associated receptor kinase galacturonan-binding 64 128 IPR025287 GO:0030247
Ahy16g3585 752 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Ahy16g3585 752 SUPERFAMILY Protein kinase-like (PK-like) 406 695 IPR011009 -
Ahy16g3585 752 CDD STKc_IRAK 427 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3585 Ahy-Chr16 153471277 153478534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3585 44 708 Receptor kinase-like Gene Family AT5G38260 33.577 1.97e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy16g3585 PK_Tyr_Ser-Thr 2.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3585 - - ahf:112697889 1523.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3585 16 153471277 153478534 Ahy6g2831 6 114167272 114174529 hybridization