Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3580 ATGGAACGAACTCATTCCAATAAGGAGAAGAAGGATTCGGGGTCTGTATACAAGGAAAATCTACGAAGTGGACCTTTTGTAGCCATAAAAATGTTGGGTAAAGCCAAGGGTAATGGTCAAGATTTCATCAGTGAAGTTGCTACAATTGGTAGAATACATCATGCCAATGTAGTAAGGTGGATTGGATTTTGTGTTGAGGGTTCAAAACGCGCTCTTGTATACGAATTTATGTCGAATGGTTCTTTAGATAAGTTTATCTTCTCCAAAGTGGATAGTATATCATCGACATACCATAAACTTTTTGAAATATCTCTTGGTGTGGCTCGTGGTATAGCTTATCTGCATGAAGGTTGCGACATGCAAATTTTGCATTTTGATATCAAGCCTCATAACATTCTTCTTGATGAGAACTTCATTCCTAAGGTCTCAGACTTTGGTCTTGCAAAGCTTAATCCTCTTGATAACAGTATTGTATCTTTGACAGCAGCAAGAGGAACTATTGGTTACATGGCTCCAGAATTGTTCTACAAAAATATTGGAGCAGTATCTTACAAAGCTGATGTCTATTGCTTTGGAATGCTTTTGATGGAAATGGCAAGTCAAAGAAGAGCATTCAAACCAATTTTACTTTTCATTTTGGATATAACATCAATTAGCTCAAAAAAGTGA 669 0.3662 MERTHSNKEKKDSGSVYKENLRSGPFVAIKMLGKAKGNGQDFISEVATIGRIHHANVVRWIGFCVEGSKRALVYEFMSNGSLDKFIFSKVDSISSTYHKLFEISLGVARGIAYLHEGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLNPLDNSIVSLTAARGTIGYMAPELFYKNIGAVSYKADVYCFGMLLMEMASQRRAFKPILLFILDITSISSKK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3580 222 Gene3D Phosphorylase Kinase; domain 1 10 77 - -
Ahy16g3580 222 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 2.8 14 205 - -
Ahy16g3580 222 Pfam Protein tyrosine and serine/threonine kinase 23 201 IPR001245 GO:0004672|GO:0006468
Ahy16g3580 222 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 205 IPR045874 GO:0004672
Ahy16g3580 222 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3580 222 SMART serkin_6 6 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3580 222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Ahy16g3580 222 SUPERFAMILY Protein kinase-like (PK-like) 13 207 IPR011009 -
Ahy16g3580 222 Gene3D Transferase(Phosphotransferase) domain 1 78 216 - -
Ahy16g3580 222 PIRSF ILK 2 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3580 Ahy-Chr16 153432111 153432857 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3580 14 202 Receptor kinase-like Gene Family AT1G66910 55.556 1.02e-68 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy16g3580 PK_Tyr_Ser-Thr 8.50E-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3580 - - ahf:112698329 443.736