Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3551 ATGGCATTGGAGAATCTTCCTTTGATCATAAAGCTTAAAATTTCTTCCAAACGAAAGCTTGATGTAAATGAAAGCGTCGAGGTCAGGAGCATGGAGGAAGGCTTTCAGGGATCATGGCACCCGGGGAAAGTTGTCCATTCTGGGAGGCTGCAGCGCCATGTCAAATATGATAACATATTACTTGATGATGAGGTGAATTACCTTGTGGAAAAGGTGAGTGTTCCGAAGGTATTGGATGGCGATAGCGACTCTTCAAATTGCAACATTCGTGGTTGGATTAGGCCGGTGCCTCCTAAGAGGGAATTTGAAAGTAGGGAACTTAAATTTGGTCTGTGTGTTGATGTGTACCATGAAGAAGCTTGGTGGGAAGGGGTTATATTTGATCACTGTGATGAAAAGCCAGAGAGGAGTGTATATTTTCCGGATTTGGGTGATGAGATGAAGATTGGAGTTCATCAAATGCGGATAACTTATGATTGGAATGAGGTTACTGGGGAGTGGCAGTCGAGAGGGAACTGGGTTTTTCTTGAAGTTCTTGAGGAGTATGAGAGGAAGATGTTTATTTCAGTTTCAGTGAAGCAAGTTTGGTATGATGTAAGGACCAAAAAGGACTTCGCCAAGATTAGGGAATGGACTTTTAATGAGAAAGAGTTATGGAAAGAAATGGTAATGGAGGTAGTTGATGATTACTTAAGGCTTACACTAGGAGAAGTTTGCTCCTCCTTAGATCTTCCAAGGAGTTTATTGAGAGAAACACCGGAGATGGAGTCTGTTGAATCTACGGCTAATGTTGACTTCAATCAGGAAGTTGATATGGCCAACTCTTTGGATGTTGCGGATAATGCATTTGGTTCTGATGATGGGATTGCTGAACTCCCTATGGAAGAAGGTGAGTCATCAAATTTGTTGAACATGGATCAAAAGTGGCCTACCATTCAGGATCAAGGGGTCAAAACTGTCCCTCAGAAAGAACCAGTTATTCCTGTTCAAGAGGTCTCAACTCAGTTTCACAAAGAAATATCCTGCGATGTATTTAATGGAAGAAAACATAGAAAGCTTCGCAGCTCAACTCAACATTGGGTACCTCTCAGATTGTCTGACGTTGAGTTATGTCCTGATGCTATTGAAGAATATGCACAGGCACCTAAAAGAGCTTGCCCGGAAAAAGCACGAAAACATCTTGCGTATCTTGGATGGGAAATTGAATGGAGAAAGCATAAAGCAAGCGACACTTGCTATAGGTACAGATATAGGTCGCCTGATAAACAGGGTGTTTACTACTCTCTCAGTCGGGTTTGTAAGTATGTGGCACAGAACCCTTTGCCGTCCCAAAATGATCAGAGTATGATGCAACTTACAGCTGACAATCATCTTGAACCTATTCTTATTGATCAATCAGAAAAGAGTCAGGATCAGAGTGCGATGCAACTTAGAGATGACAATCATCTTGCACCTATTTGTATTGATCAATCAGAAAAGAGTCATGATCTAAATATTTTGCCACCAATTGTGTCGTCTCCTGTGGATGAAGTTGCAGATGAACCTGAGTTTTGTCCTCAAGCTGTTTTAGAATATAGCTTGAATAGATCTGCAATGCGAGGGCCTGACATGAAAGTGGGTAGGTCCAAAGCAAAGAGGCATCTATTGGCTGAAGGATGGAGCTATCACTATGCAAACCCAAGAAATAAAAGACAAGGGTTTGTGTATATCCCTCCAGACAAGGGAAGAAATCTCCCAACACTCCATGCAGCTTGCCATTATTGTATTGAACAAAATGTTGATAAATGGACCAAGCTCGGAATGCAACCTTTGAATGCACAGGATAATGTTGACCAGGTTTGGAGTGCCAATTTATTGCAGAAAGCGTCCCAATGGCTTCGAGAGGAACGCATGGTACCTCCCACAGAAGTCATAACTTCAAGTGGATCAAACCATAGTCGGAAGCGGAAACTCTTGAACAATACAAAGCCCAGCTTATCTAAGCACCAAAGAAATGGATTACCTCGACGCGTGCTGCGATCAAATAAAAGGGTGCAAAAGGTGTCTACCCCTTCTTTGTCACACCAGAAACCTCAGAATGTACTCTCTTGGTTGATAGACAACAACATTCTGTTGCCAAGGTCTAAGGTTTCTTACAAGCCAAAAGGCAGGCTCTGTTCAGCTGAAGGGAGAATAAGCAGAGATGGAATCAAGTGTAATTGTTGTTCGAAAGTATATAGTCTTGCTGGCTTTGAAAGTCATGCTAGTGGCTGTAGTACACGCAGACCGGCTGCAAGTATTATTTTAGAAGATGGTAGATCACTATTAGATTGCCTGATAAAAATGGTGGAAGATCATATGACAAGGGAAGCTATGGCAAAACCACCGAAATATTTTCCTAAAGGCGAGAATGACAATATTTGTTCTGTTTGCCACTATGGTGGGAATCTAATTTTATGCGATCAATGTCCATCTTCATTTCATGTGACATGTCTAGGTGTGGAGAACATTCCTGAAGATGACTGGTTTTGCCCATCATGTCGATGTGCAGTTTGTGGTGAAATAGAAGAAGAGGAGGGAGATTTCCTTGTTTGCATTCAGTGTGAACATAAATATCACTTTAAGTGCCTCAGAACTAAATATGCAACTAACTCGAAAAGATATAGTAAAAACTGGTTCTGCGGAAGGGACTGTGAAAAGATATATTTTGGTCTCCATAAGCTACTAGGAGAGCCAGTTTCAGTGGGCATTAACAATCTAACTTGGACATTGGTGAAATATATAAACTCTGAGAGTAGTGATCCGTGTACTACTAAAGGTTACTTATTGCCAGAAAGTTACAGCAAACTCAATGTTGCACTCTCAGTGATGCATGAATGTTTTGAGCCCCTAAAGGATCCTTCGTCTACCAGAGATCTCATGGAAGATGTTTTATTCAGTCGATGGTCAACACTTAATCGATTGAATTTCCATGGTTTCTATACCGTACTTCTGGAGAGAAATGAAGAACTGATAAGTGCAGCAACTGTTAGGGTTTACGGAAAGAAGGTAGCAGAATTGCCTCTTATTGGTACCAGATTACAGTATCGTCGACATGGAATGTGCCGCATTTTGATGAATGAGCTTGAAAAGACGCTCATGCAGTTGGGAGTGGAGAGGCTCGTTTTGCCTGCTGTTCCTAGTGTTGTAGACACATGGACTGGTTCTTTTGGCTTTGTAAAGATGACAGAGTTCGAGAGGTCGCAATTCTTGGACAATACTTTTTTAGATTTTCAGGATACCATCATGTGTCAGAAGCTGCTGAAGATTCCATCTCCAGAATCGGTTTTGTTAATAGAGTCCCAACAAAGGACACAGCATGTTTTGCCTGGAAACAAGTTAAATTTTGACACTGATCTGATATCTGAAGTATTACACCAAGCAGAAGAAACTGACAAAGGAGAGAGAAAGAATTCACAAATCCACAATAATTGTGCTGGAAGCAATGATCATTACAGTAATGGTGCCATTGACATTGAGCAAGTCACACCGGTGAATAAACCAAGTCCTGAGGATCCACCGAGCTCTATTGTAACACAAGCTGACAGTAATAATGGCTCACCATATAAGTGCTACTACAAAAGAAGAAAATACACAAAGTTTTAG 3624 0.4131 MALENLPLIIKLKISSKRKLDVNESVEVRSMEEGFQGSWHPGKVVHSGRLQRHVKYDNILLDDEVNYLVEKVSVPKVLDGDSDSSNCNIRGWIRPVPPKREFESRELKFGLCVDVYHEEAWWEGVIFDHCDEKPERSVYFPDLGDEMKIGVHQMRITYDWNEVTGEWQSRGNWVFLEVLEEYERKMFISVSVKQVWYDVRTKKDFAKIREWTFNEKELWKEMVMEVVDDYLRLTLGEVCSSLDLPRSLLRETPEMESVESTANVDFNQEVDMANSLDVADNAFGSDDGIAELPMEEGESSNLLNMDQKWPTIQDQGVKTVPQKEPVIPVQEVSTQFHKEISCDVFNGRKHRKLRSSTQHWVPLRLSDVELCPDAIEEYAQAPKRACPEKARKHLAYLGWEIEWRKHKASDTCYRYRYRSPDKQGVYYSLSRVCKYVAQNPLPSQNDQSMMQLTADNHLEPILIDQSEKSQDQSAMQLRDDNHLAPICIDQSEKSHDLNILPPIVSSPVDEVADEPEFCPQAVLEYSLNRSAMRGPDMKVGRSKAKRHLLAEGWSYHYANPRNKRQGFVYIPPDKGRNLPTLHAACHYCIEQNVDKWTKLGMQPLNAQDNVDQVWSANLLQKASQWLREERMVPPTEVITSSGSNHSRKRKLLNNTKPSLSKHQRNGLPRRVLRSNKRVQKVSTPSLSHQKPQNVLSWLIDNNILLPRSKVSYKPKGRLCSAEGRISRDGIKCNCCSKVYSLAGFESHASGCSTRRPAASIILEDGRSLLDCLIKMVEDHMTREAMAKPPKYFPKGENDNICSVCHYGGNLILCDQCPSSFHVTCLGVENIPEDDWFCPSCRCAVCGEIEEEEGDFLVCIQCEHKYHFKCLRTKYATNSKRYSKNWFCGRDCEKIYFGLHKLLGEPVSVGINNLTWTLVKYINSESSDPCTTKGYLLPESYSKLNVALSVMHECFEPLKDPSSTRDLMEDVLFSRWSTLNRLNFHGFYTVLLERNEELISAATVRVYGKKVAELPLIGTRLQYRRHGMCRILMNELEKTLMQLGVERLVLPAVPSVVDTWTGSFGFVKMTEFERSQFLDNTFLDFQDTIMCQKLLKIPSPESVLLIESQQRTQHVLPGNKLNFDTDLISEVLHQAEETDKGERKNSQIHNNCAGSNDHYSNGAIDIEQVTPVNKPSPEDPPSSIVTQADSNNGSPYKCYYKRRKYTKF* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3551 1207 SMART ring_2 842 894 IPR001841 -
Ahy16g3551 1207 SMART ring_2 801 840 IPR001841 -
Ahy16g3551 1207 SUPERFAMILY FYVE/PHD zinc finger 842 889 IPR011011 -
Ahy16g3551 1207 SUPERFAMILY FYVE/PHD zinc finger 777 841 IPR011011 -
Ahy16g3551 1207 Pfam Agenet domain 24 98 IPR008395 -
Ahy16g3551 1207 PANTHER PHD ZINC FINGER PROTEIN 13 1136 - -
Ahy16g3551 1207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 842 894 IPR013083 -
Ahy16g3551 1207 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 13 1136 - -
Ahy16g3551 1207 Pfam PHD-finger 800 842 IPR019787 -
Ahy16g3551 1207 CDD NAT_SF 989 1049 - -
Ahy16g3551 1207 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 943 1071 IPR016181 -
Ahy16g3551 1207 MobiDBLite consensus disorder prediction 1178 1193 - -
Ahy16g3551 1207 Gene3D - 950 1093 - -
Ahy16g3551 1207 ProSiteProfiles Zinc finger PHD-type profile. 798 843 IPR019787 -
Ahy16g3551 1207 MobiDBLite consensus disorder prediction 636 666 - -
Ahy16g3551 1207 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 949 1094 IPR000182 GO:0016407
Ahy16g3551 1207 SMART PHD_3 800 841 IPR001965 -
Ahy16g3551 1207 SMART PHD_3 842 891 IPR001965 -
Ahy16g3551 1207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 792 841 IPR013083 -
Ahy16g3551 1207 MobiDBLite consensus disorder prediction 1146 1166 - -
Ahy16g3551 1207 MobiDBLite consensus disorder prediction 1135 1195 - -
Ahy16g3551 1207 Pfam Tify domain binding domain 723 774 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3551 Ahy-Chr16 153104027 153112145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3551 29 438 PHD Transcription Factor Family AT5G58610 32.289 3.02e-63 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy16g3551 Agenet 4.60E-14 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3551 - - aip:107644722 2246.85