Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3532 ATGTCTCGTTGGTTATCAATGTTGTCTTTGGCACTGCTGTTGCCTCTGATTGTGTGGTCCAAAGCTAATGATAGTAAAGATCATGAAAGAGAAGGAAGAAGAAGCTGCATAGACTACAAGATTTTGAACATTGGAGCAATCATAGACTTCCATTCACTAATTGGAATGGAGCAGAAGATAGCTATGGAAGTTGCTATCAAAGATGTTAATAGCATATTGAGTTGTTCCAAGCTTGTTTTGAACTTCAATGATTCTCATCGGAATCCATCTAGTATGGTGGCAGCTGATCTTGCAAACAGCAAAAAGGTGCAAGCTATCATAGGAACAAAACTTGATGGAGCAACATTGGTCAATGAGATTCTTCAAAGCTCAAAGGAAATTCCCATCATATCCCTAACATCAAGTTCAGAAATAAGACAAATTCCATTGCCAAACTTCATACAAATAGGTAATGACATTACCTTAAACTTACAATGCATTGCAGCCATCATATGTGAATTCAATTGGAGAAAAGTGACAGCAATTTATGAACATGACAATGGATTCACCTCTTATGATTCAGATATATTAACAAAACTCTCATATTCTCTTAGCCATGTTAATTCTGAGATTGAAAACTATGTAGCTTTTCCTTCAGTGGACACCCTTTTAGACCCAAAAACAGCTATAGAACATGAACTTAAGAAGCTAAAGAACAAGAGCTATAACAGGGTTTTCTTGATTCTACAATCATCATTAGAGTTTGCAACTATTCTGTTCGAGAAAGCGAATCAGATGGGGTTGATGGAAAAAGGGTCAGTGTGGATCATCACAGATGACATAGCTAGCCATCTTGATTCACTGGATTATTCATCTGTTACCTTCAATATGCAAGGTGTTATTGGGTGCAAAACAAGCTTCGTCGAGTTGAGCCAGACATTCAAACGTTTCAAATTCGCGTTCCGCCGCGAATTTGGGTTGGAATATCCTGAAGAAGAAATAGAAAACCCCATCCAAGTCTCTCTGCTCTTAGAGCTTATGATGCCATTTGGATCATTGCTCATGCTCTAA 1050 0.379 MSRWLSMLSLALLLPLIVWSKANDSKDHEREGRRSCIDYKILNIGAIIDFHSLIGMEQKIAMEVAIKDVNSILSCSKLVLNFNDSHRNPSSMVAADLANSKKVQAIIGTKLDGATLVNEILQSSKEIPIISLTSSSEIRQIPLPNFIQIGNDITLNLQCIAAIICEFNWRKVTAIYEHDNGFTSYDSDILTKLSYSLSHVNSEIENYVAFPSVDTLLDPKTAIEHELKKLKNKSYNRVFLILQSSLEFATILFEKANQMGLMEKGSVWIITDDIASHLDSLDYSSVTFNMQGVIGCKTSFVELSQTFKRFKFAFRREFGLEYPEEEIENPIQVSLLLELMMPFGSLLML* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3532 349 SUPERFAMILY Periplasmic binding protein-like I 42 323 IPR028082 -
Ahy16g3532 349 PANTHER GLUTAMATE RECEPTOR 40 330 - -
Ahy16g3532 349 Gene3D - 38 152 - -
Ahy16g3532 349 Pfam Receptor family ligand binding region 59 298 IPR001828 -
Ahy16g3532 349 Gene3D - 153 321 - -
Ahy16g3532 349 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3532 Ahy-Chr16 152851673 152853587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3532 32 318 Ion Channels AT4G31710 28.378 4.21e-23 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3532 - - ahf:112757912 655.595