Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3507 ATGCTTAGCCGCGGACAGGTTGAACATGTTCGATCAGAGAGGAACTTACTGGCAGAGGTTGACAGTAGATGCATAGTAAAACTCCATTACTTGTTCCAAGATGCAGATTTCTTATATCTCATCATGGAATATTTACCTGGTGGTGACATTATGACATTGTTGATGGATGTTGCTCGTTTCTGCATTGCTGAAAGAATTCTCACTATTCACTCAATGCATCAGTACAACTACGTCCACAGATTCTGA 246 0.4065 MLSRGQVEHVRSERNLLAEVDSRCIVKLHYLFQDADFLYLIMEYLPGGDIMTLLMDVARFCIAERILTIHSMHQYNYVHRF* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3507 81 ProSiteProfiles Protein kinase domain profile. 1 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3507 81 Pfam Protein kinase domain 8 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3507 81 Gene3D Transferase(Phosphotransferase) domain 1 49 80 - -
Ahy16g3507 81 SUPERFAMILY Protein kinase-like (PK-like) 3 80 IPR011009 -
Ahy16g3507 81 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 80 - -
Ahy16g3507 81 Gene3D Phosphorylase Kinase; domain 1 1 48 - -
Ahy16g3507 81 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3507 Ahy-Chr16 152551353 152556303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3507 1 80 AGC Kinase Gene Family AT5G09890 79.310 6.52e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Ahy16g3507 Pkinase 6.10E-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3507 K08790 - ahf:112697810 165.236