Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3496 ATGGAAAGTGGATTACCCTTGCTTCATTGTCTCTTGCAACATACTCTTAGAAACCTATGCTCTTCTTCAACTTCTTCTACTTCAGATTCTTCTTCTTCTTCTTCTTCCAAATGGGTTTATGCTGTTTTTTGGAGAATTGTACCAAGAAACTTTCCTCCTCCAAGGTGGGAATTTGGTGGAAGTGCTCTTGATCGTTCCAAAGGGAACAAAAGAAACTGGATCCTTGTTTGGGAAGATGGATTCTGTGATTTCAATGAATGCCAACATGGAAGGAGCTTGAATGAAAGGTTTGGAGCTGAAGTATTCTTCAAAATGTCTCATGAAGTTTACAATTTTGGAGAAGGATTATTAGGGAAAGTGGCTGCAGATAATAGTCACAAATGGGTTTATGGTGACACTCAAAATGGGTGTGAATCTGACTACGTTGGTACATGGAATTCTTCAAGTGATCATCAACCAAGAGCTTGGGAGTTTCAGTTCAATTCAGGGATTCAGACTGTTGCTGTCATTGGTGTTAGAGAAGGCTTAGTGCAACTTGGTTCATTTAACAAGATTGCTGAAGATCTGAACATAGTGATGAGCATACAAAGAAAATTCAGCTACCTTCAAAGCATACCAGGTGTGTTTGCAATTCAAAGACCATCATACTTACCTATCCAACAACAAAATCCATACCTTGCAAAATCCAATTTCCAAATCATGGACTCCAATAATGACATGCCTCTCTCAAACTACAACATGGTGATCAACCAAATTGGATCAATTAATAATAATAATAGTAGTAGCAGAATACTTGAAGAAAAATCAAACTATTTTTCCATGGTAGCAATCAACATGATGGGAAGGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGCCTACAAGATGGAACACAACAAGGGCCAATGCAACAACAAAGTCTTTGGTCAGGTCCTTCTACTTTGCCAAACATGTCTTGTAGTCTTGGTGCATTGCTATCAAGGCTCCCTAATGAAGTTCCATCATGCTTTAATCCCAACTCTCAAGTTCTTGAAACCAATAATAGGATGATCATCAACACCACAAGCCAAAGGGTCAAGATTGAAGATTGTGGATTTCATCTTGGTGGTGATGCTGATCATAAAGAAAACGCCAGGTCGTAA 1170 0.3692 MESGLPLLHCLLQHTLRNLCSSSTSSTSDSSSSSSSKWVYAVFWRIVPRNFPPPRWEFGGSALDRSKGNKRNWILVWEDGFCDFNECQHGRSLNERFGAEVFFKMSHEVYNFGEGLLGKVAADNSHKWVYGDTQNGCESDYVGTWNSSSDHQPRAWEFQFNSGIQTVAVIGVREGLVQLGSFNKIAEDLNIVMSIQRKFSYLQSIPGVFAIQRPSYLPIQQQNPYLAKSNFQIMDSNNDMPLSNYNMVINQIGSINNNNSSSRILEEKSNYFSMVAINMMGRNNNNNNNNNNNNNNNNNNNSLQDGTQQGPMQQQSLWSGPSTLPNMSCSLGALLSRLPNEVPSCFNPNSQVLETNNRMIINTTSQRVKIEDCGFHLGGDADHKENARS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3496 389 MobiDBLite consensus disorder prediction 282 321 - -
Ahy16g3496 389 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 94 199 IPR025610 -
Ahy16g3496 389 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 85 IPR025610 -
Ahy16g3496 389 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 372 - -
Ahy16g3496 389 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3496 Ahy-Chr16 152378822 152382061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3496 23 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.432 4.07e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3496 - - ahf:112697798 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3496 16 152378822 152382061 Ahy16g3496 16 152378822 152382061 ECH