Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3468 ATGTTGTGTGCTTGCTCAGGGGAGCAATTCAAATTCGAGGAGGCGCCGCCGCAGTCACCGGAGTCACTGGCAACAAGAGATTTCTCTGCCAGTGGACTTTCTTCATCAAGGACTGGGGGTGATTGGGATTCTAAATTTGATCAGAACCAAGTTGAAGAAGCTGAATCAACTCTTAAAGAAGCTCTTTCTTTGAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTTTTTCAGGGCATTGAAATCAAGGCCTTGACACCAAGGATGATAAGAGCCATTGCTGAAAGAACTAGGCCAAAAAAACAACGTTCTAGAGCTGATAATGTGGTCCCTAATGTGATGTCAATGCATTCAGTAAGCCTTCTTGTTGAGGCAATCTTGCTTAAATCCAAGTCCTTAGAGGAACTCGGGCGATACACCGAGGCTGCAAACACGTGCAGCATAATTCTGGATACGGTTGAGTCTGCTCTTTCTAATGGAATGCCAGATGGCATCGCCGAAGAGTGTAAGTTGCAAGACATGTTCCACAGAGCAATTGAACTGCTTCCAACTCTATGGATCAAGGCAGGTAATTTAGACGAAGCTGTCACGGCTTATCGCCGTGCTTTGATCAAGCCGTGGAATATGGAGCCAGGAAAGTTGGCCAGTATGCAAAAAGATTTGGCCACCACACTACTCTATTGTGGTGCTGAAGTAGACCTGCCGCCGCAATTACAAGCGAGGTCTCCAGTGACACCAAAGAGTAACATCGAAGAAGCAATACTTTTGCTATTAGTACTGATGGCAAAGATGGTGGTTCAGGAAATACAATGGGACAGTGAAACAGCAGATCATCTTACATTCGCACTTTCTGTTACCGGAATGTTTGAATCATTGGCTGATTATGTGGAGCAGATCCTTCCTGGTATCTATGATCGAGCCGAGAGATGGTACTTTCTTGCTCTTTGTTACAGTGCAGCTGGTCAGGATGAAGTGGCCTTGAACTTATTGAGGAAGTCTTGTGGTAGTTCTGAAGCAAATTGCAGACCCCATTTCCCTTCATTTTTGTTTGGTGCTAAACTGTATTCCCGGTATCCAAACCATGCTCTTGAAGGCATTAAGTTTTCCCGCGAAGCTATCGATCTAGCAAGGCTTCAAAATAAGCATTTTTTGGGTCAGGGCAAAAAATTTCTGGGTGTTTGCTCCGGCACTGCGGCTAGAAGATCTGTGCTGGATTCTGAAAGAACTATATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAGGCTGCTCTAAGTCAAAATGATGATCCTGAAGTGATATTCAACCTTGGACTTGAAAATGCAATTCAAAGGAATCTTGATGCAGCTTTCGACAATATAATGATGTACTCAGATATGACTGTTGGTAGCTCGAAAAGAGGTTGGCAACTGTTAGCGCTCATAGTATCTGCACAACAGCGGTTTAAGGATTCAGAAACAATAGTTGATTTTGCGTTAGAAGATACTGAAAAGATTGACCAGTTAGAACTTCTGAGATTGAAAGCAGTACTCCAAATTGCGCAGGAGAAACCGAAGCAGGCAGTAGAGACCTACAGAATCTTGCTAGCACTGATCCAGGCTAAAAAGGAGCCTTGGCATCAAGATAAGAACAACTTTGATCAAGCAGAAACATTCAAACATGAGGCACTTCAAGAAAGGAAGTTGGAAATGGAAGCATGGCAGGATTTGGCAACAATATATGCAGACTTTAGTTCATTTCTTGATGCAAAAGCTTGTCTTGACAAAGCTCAGTTAATAGAATTTTTCTCTCCCAGAAGTTGGCACATTACTGGAATGTTATTTGAAGCACAATCATTATACCAGGAGGCCTTTGTTTCATTCTCAATCTCATTGTCAATAGAACCTGATTACATTCCAAGTATTATTTCATCTGCGGAATTGATGATCAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGCTTTTTGATGAATGCATTGAGAATAGAACCAACAAACCATGATGCTTGGTTCAACCTTGGATTGGTTTCTAAAATGGAAGGTTCATTACAACAAGCAGCAGATTTCTTTCAAGCTGCATATGAACTCAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTAA 2160 0.4227 MLCACSGEQFKFEEAPPQSPESLATRDFSASGLSSSRTGGDWDSKFDQNQVEEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIEIKALTPRMIRAIAERTRPKKQRSRADNVVPNVMSMHSVSLLVEAILLKSKSLEELGRYTEAANTCSIILDTVESALSNGMPDGIAEECKLQDMFHRAIELLPTLWIKAGNLDEAVTAYRRALIKPWNMEPGKLASMQKDLATTLLYCGAEVDLPPQLQARSPVTPKSNIEEAILLLLVLMAKMVVQEIQWDSETADHLTFALSVTGMFESLADYVEQILPGIYDRAERWYFLALCYSAAGQDEVALNLLRKSCGSSEANCRPHFPSFLFGAKLYSRYPNHALEGIKFSREAIDLARLQNKHFLGQGKKFLGVCSGTAARRSVLDSERTIFQRESLNFLNEAALSQNDDPEVIFNLGLENAIQRNLDAAFDNIMMYSDMTVGSSKRGWQLLALIVSAQQRFKDSETIVDFALEDTEKIDQLELLRLKAVLQIAQEKPKQAVETYRILLALIQAKKEPWHQDKNNFDQAETFKHEALQERKLEMEAWQDLATIYADFSSFLDAKACLDKAQLIEFFSPRSWHITGMLFEAQSLYQEAFVSFSISLSIEPDYIPSIISSAELMIKLGMQSLPIARSFLMNALRIEPTNHDAWFNLGLVSKMEGSLQQAADFFQAAYELKLSAPVQKFE* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3468 719 ProSiteProfiles TPR repeat profile. 610 643 IPR019734 GO:0005515
Ahy16g3468 719 SUPERFAMILY TPR-like 554 710 IPR011990 GO:0005515
Ahy16g3468 719 SUPERFAMILY TPR-like 46 464 IPR011990 GO:0005515
Ahy16g3468 719 MobiDBLite consensus disorder prediction 22 45 - -
Ahy16g3468 719 Gene3D Tetratricopeptide repeat domain 483 658 IPR011990 GO:0005515
Ahy16g3468 719 Gene3D Tetratricopeptide repeat domain 43 349 IPR011990 GO:0005515
Ahy16g3468 719 Coils Coil 59 79 - -
Ahy16g3468 719 ProSiteProfiles TPR repeat profile. 680 713 IPR019734 GO:0005515
Ahy16g3468 719 MobiDBLite consensus disorder prediction 11 45 - -
Ahy16g3468 719 PANTHER PROTEIN NPG1 1 718 IPR043376 -
Ahy16g3468 719 Pfam Tetratricopeptide repeat 44 92 - -
Ahy16g3468 719 Gene3D Tetratricopeptide repeat domain 659 715 IPR011990 GO:0005515
Ahy16g3468 719 PANTHER PROTEIN NPGR1 1 718 - -
Ahy16g3468 719 SMART tpr_5 320 353 IPR019734 GO:0005515
Ahy16g3468 719 SMART tpr_5 136 169 IPR019734 GO:0005515
Ahy16g3468 719 SMART tpr_5 610 643 IPR019734 GO:0005515
Ahy16g3468 719 SMART tpr_5 680 713 IPR019734 GO:0005515
Ahy16g3468 719 SMART tpr_5 514 547 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3468 Ahy-Chr16 152042990 152048448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3468 1 718 Calmodulin-binding Proteins AT1G27460 59.583 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3468 K21843 - gmx:100799086 1127.08