Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3465 ATGGAAGGAAAGATTAGAATAGAAGAGCGTTCATTGGCTCCATTACAAGAATATGGTGCTTCTGAGGATGAATATGTGAGCATTTTGATTGAGAGAGAAAAGGGTACTCTTGCTTTCAAAAATATTGAGTCTTTCATATTTGTGAATTGCTTCAGTCATTCACGCATTAATGCTCTTAATTGGATTCTTCAGACAAGAGCAACACTTGGTTTTAGCTTTCAAACAGCTTATTTGTCCATGGCATACTTTGACAGATTCCTTTCCAAATGTTCCATTGATAATGGTAAGTGTTGGAAAATGAGGTTACTATCAATTGCATGTCTTACTCTAGCTGCAAAGATGGAGGAGAGTGAAGTGCCGGTGCTAACCGAGTTTCAATCGGAAGATTATTGCTTCGAAAACAAAGTGATTCAGAGAATGGAGCTCTTGGTGCTTAGCACATTGGAATGGAACATGGTTATGATCACCCCATTAGTTTTCCTTCCTTATTTCATCACAAAGCTCTGCAATGAATCCCAAACATGCCATGTTTTGTCCAAGACTATTCAAATCATCTTCACACTAATTCAAGAGGTCAATTTAATGGATCATAGGCCATCTGTTATTGCGGCTGCGGCGACTTTGGTGGCAATGGATCAGCACTTGACAATAGAATCAGTAAAATTGAAGATGAGTTCAATTCATGAATTCAGATTTCTTGTAGCTGAAGATATATTTGCATACTATGATCAAATTCAAAGTTTCTACATTGAGAAAGAAAACTATAAGACACAAGAGAAGGAGAGTTACACTCAATAA 798 0.3709 MEGKIRIEERSLAPLQEYGASEDEYVSILIEREKGTLAFKNIESFIFVNCFSHSRINALNWILQTRATLGFSFQTAYLSMAYFDRFLSKCSIDNGKCWKMRLLSIACLTLAAKMEESEVPVLTEFQSEDYCFENKVIQRMELLVLSTLEWNMVMITPLVFLPYFITKLCNESQTCHVLSKTIQIIFTLIQEVNLMDHRPSVIAAAATLVAMDQHLTIESVKLKMSSIHEFRFLVAEDIFAYYDQIQSFYIEKENYKTQEKESYTQ* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3465 265 SUPERFAMILY Cyclin-like 138 228 IPR036915 -
Ahy16g3465 265 Pfam Cyclin, C-terminal domain 155 258 IPR004367 -
Ahy16g3465 265 PANTHER CYCLINS 21 255 IPR039361 -
Ahy16g3465 265 Pfam Cyclin, N-terminal domain 53 152 IPR006671 -
Ahy16g3465 265 SMART cyclin_7 60 146 IPR013763 -
Ahy16g3465 265 Gene3D - 148 263 - -
Ahy16g3465 265 PANTHER CYCLIN-D5-1 21 255 - -
Ahy16g3465 265 ProSitePatterns Cyclins signature. 55 86 IPR006671 -
Ahy16g3465 265 Gene3D - 48 147 - -
Ahy16g3465 265 SUPERFAMILY Cyclin-like 20 152 IPR036915 -
Ahy16g3465 265 CDD CYCLIN 54 145 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3465 Ahy-Chr16 152014395 152016299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3465 21 227 Core Cell Cycle Gene Families AT4G37630 37.156 7.70e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3465 K18811 - gmx:100798728 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3465 16 152014395 152016299 Ahy16g3465 16 152014395 152016299 ECH