Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3443 ATGAGTGATTTACAATGGAAGAAGGTGGAGGTCTTGGGAGCAGGTTCTTATGGCACTGTTTCTCTTGCCATTCTTGTTGATGAACAAAATCGGTTTCACAGCTTCATTGCTGTAAAGAGCTCCATTCCCAGGTTGGCATTCTCACTGGAGAAAGAAGAACAGATTTTTAAATCACTTTGGGAAGGTGAAAGTAGTGGTTGCCAAGAAATTATTGAATGCTTTGGAACTGAGACCACATTAGAGCACGGACATCAATTCTACAATCTTTTCTTGGAGTATGCTCCTTATGGTTCTTTGGCTGACTTGATCCACAAGAAACCTCTTCCCGAGACCGAGGTGAGTGTCTATGCACGCATGATTGTTAAAGGACTTTCACATATTCATCGCAAAGGAATCGTCCACTGTGACCTCAAGCCGGAGAACATTCTTGTGTTTCCTTCATTGGATAAAGAGATTGCAAACTATCAATTGAAGATTGCAGATTTTGGATTATCGAAAACCAAAGAGGAGAAAGCAGATGTTGAGTTGTGGAAGTCCAAGCCAAGAGGTACGCCGTCATACTTGTCGCCGGAAGCGTTTTCCGGTCATATTAATGCTCCGATGGATATATGGGCACTTGGTTGCATAGTGATTGAAATGCTCACTGGATTGCCTGCCTGGAGTGAGAGCCCTTTGCTTATTGAGGAGTTGAGGTACTTGGTTGAGCATCATAAACTATCACCCAAGAAGCCGCAGGGAATCGGTTTTTTCTGCCATGATTTTCTGGAAAAGTGTTTTATGAAGGATCCTAGCAAGAGGTGGACTGCAGACAGGCTTCTTGATCATCCTTTCCTTTATATCACCCTGTTTCATTCATATTATCTTGCAACTTGGCTATGA 879 0.4278 MSDLQWKKVEVLGAGSYGTVSLAILVDEQNRFHSFIAVKSSIPRLAFSLEKEEQIFKSLWEGESSGCQEIIECFGTETTLEHGHQFYNLFLEYAPYGSLADLIHKKPLPETEVSVYARMIVKGLSHIHRKGIVHCDLKPENILVFPSLDKEIANYQLKIADFGLSKTKEEKADVELWKSKPRGTPSYLSPEAFSGHINAPMDIWALGCIVIEMLTGLPAWSESPLLIEELRYLVEHHKLSPKKPQGIGFFCHDFLEKCFMKDPSKRWTADRLLDHPFLYITLFHSYYLATWL* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3443 292 SMART serkin_6 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3443 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Ahy16g3443 292 Pfam Protein kinase domain 7 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3443 292 Gene3D Transferase(Phosphotransferase) domain 1 4 287 - -
Ahy16g3443 292 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Ahy16g3443 292 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 280 - -
Ahy16g3443 292 SUPERFAMILY Protein kinase-like (PK-like) 6 279 IPR011009 -
Ahy16g3443 292 ProSiteProfiles Protein kinase domain profile. 6 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3443 292 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3443 Ahy-Chr16 151684768 151685804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3443 4 280 MAP Kinase Kinase Kinase AT4G36950 42.606 5.05e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy16g3443 Pkinase 8.20E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3443 - - aip:107647747 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3443 16 151684768 151685804 Ahy16g3443 16 151684768 151685804 ECH