Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3394 ATGAACTTTGATCATGGTGTCTCCAACACAAGCCTTCAACTTGGTCTTGCTCTTGGAATTGGCTTCCATCATCAAGAGAAGAATTGCATGAAGAAAAAGGAGGATGATCCATCAAGAAAATGCAATAATAAGGCATACCCATCTCTTACATTAGGACCAGCAATAATTGATGATGATAATCATAATAATCAAGCTTCAAAGATTATTGAAGACTCTAATTCTTCTCCAAGTGCAGTGTCATCGTTTTCCAACTCTTCTATCATAATCAAGAAGGAGAAAGATCAATTCTTGGTTGAAGAATTTGAGGTTGAGATTGATGAGAAGGCTCCATCATCATCAAGGGATGAAGATGGTAACAACACAAAAAGGAAGAAACTTAGGCTCTCAAAAGAACAATCTATAATCTTGGAGGAAAGCTTCAAGAACTATTCTAATCCCAATCCGAAGCAAAAGCAAGAATTGGCAACACACTTGCATCTGCTGCCGAGACAAGTGGAGGTATGGTTCCAGAACAGGAGAGCCAGGACAAAGCTGAAACAAACAGAATCAGATTGTGAGTTCCTGAAGAAGTGCTACGAAAGTCTAACAGAAGAGAATAAGAGGCTCCAAAACGAGCTTCAAGAACTCAAATCAATGCAAACAACACCACCCTTTTCCATGCAAATTCCACCAACAACTCTTACTATATGCCCTTCTTGTGAGAAAATTTGGTCTAATAATAATAATAATAATAATAATAATGGGGAATTATTGCTTATAAGTTCAAAAACTCATCAACACCATAATCATTTCTACAAAAATAATGGATATCCATTATTCAAACACTCATCATCCGCAACATGCTAG 846 0.3688 MNFDHGVSNTSLQLGLALGIGFHHQEKNCMKKKEDDPSRKCNNKAYPSLTLGPAIIDDDNHNNQASKIIEDSNSSPSAVSSFSNSSIIIKKEKDQFLVEEFEVEIDEKAPSSSRDEDGNNTKRKKLRLSKEQSIILEESFKNYSNPNPKQKQELATHLHLLPRQVEVWFQNRRARTKLKQTESDCEFLKKCYESLTEENKRLQNELQELKSMQTTPPFSMQIPPTTLTICPSCEKIWSNNNNNNNNNGELLLISSKTHQHHNHFYKNNGYPLFKHSSSATC* 282
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3394 281 PANTHER - 11 258 - -
Ahy16g3394 281 MobiDBLite consensus disorder prediction 107 127 - -
Ahy16g3394 281 Pfam Homeodomain 122 177 IPR001356 GO:0003677
Ahy16g3394 281 Coils Coil 178 215 - -
Ahy16g3394 281 CDD homeodomain 122 180 IPR001356 GO:0003677
Ahy16g3394 281 SMART HOX_1 121 183 IPR001356 GO:0003677
Ahy16g3394 281 ProSiteProfiles 'Homeobox' domain profile. 119 179 IPR001356 GO:0003677
Ahy16g3394 281 Pfam Homeobox associated leucine zipper 179 212 IPR003106 GO:0006355|GO:0043565
Ahy16g3394 281 ProSitePatterns 'Homeobox' domain signature. 154 177 IPR017970 GO:0000981|GO:0006355
Ahy16g3394 281 Gene3D - 115 186 - -
Ahy16g3394 281 SMART halz 179 222 IPR003106 GO:0006355|GO:0043565
Ahy16g3394 281 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 11 258 - -
Ahy16g3394 281 SUPERFAMILY Homeodomain-like 110 180 IPR009057 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy16g3394 Ahy-Chr16 150952989 150956228 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3394 88 236 Homeobox Transcription Factor Family AT2G22800 59.060 1.83e-53 173
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy16g3394 Homeodomain 1.80E-16 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3394 K09338 - gmx:100797650 269.626
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3394 16 150952989 150956228 Ahy16g3394 16 150952989 150956228 ECH