Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3378 ATGGGTATCTGTATATCCATTGCATCTTCTGAGATTCATGGGGCCCCTAAAGAAGTTTATGATGAGTGTGTGATAACATTTGAAGCAAACAAGGTTGTAAGTGGTAATCAAGAATTTTGTTCTGCTTACTCTAAACAAGGGACCAAAGGACTCAACCAAGATGCTGCTTCTATTTACCAGGGTTATGGAATGGAAGATGGAATATTTTGTGGTGTTTTTGACGGGCATGGAAGGACTGGACGCATGGTGAGCAACATGGTTAACAGAAACTTATCTTCACTCATACTTGCCCAAAAGAATGCCTTTGAAAGGATTAATAACATAGAAAATGGTGATTCCAACACCCTAAACGACCATGTTGACACAGTCAAAGGTGACAATCATAAGGATCCAAAGAATTTTCAGATATGGAAAGAAGCAGTTACAAGTGCTTTCAAGCTCATGGACAAGGAGATCAAGTTGCAAGAGAATCTAGATTGTTCTTGCAGTGGAACAACTGCTATTGTTGTCATAAAACAGGGTGAAGGTCTTATCATAGCTAATTTGGGTGACTCAAGGGCAGTGTTGGGGACAATCTGTGATGAAGAACTCATGGCCATTCAATTGACCACAGATTTGAAGCCTGGATTACCTAGTGAAGCAGAAAGAATAAGGAGGTGCAATGGTTGTGTATATGCATTAAAGGAAGAACCACATATCCAAAGAGTGTGGATACCAAACTATGAGAACTCACCGGGACTTGCCATGTCTCGTTCTTTTGGAGATTTCTTGCTCAAAGAACATGGTGTCATTGCCATCCCTGATGTTTCATATTACCCTCTAACATCATCTGACCAATTCCTTGTTCTTGCAAGTGATGGTGTGTGGGATGTACTAAGCAACATAGAGGTTGCAGCAATAGTGTGGACCACAAAGAGTGAAGAGGAAGCAGCAAAGAAAGTGGTGGAAGCAGCCAATGCTGCATGGAGAAGGAAGTACCCTTTTTCCAAGATTGATGACTGCACTGTGGTTTGCCTCTTCCTAAAAAACGAAAACAAAAGAAACTCAGGAATGTGGAAAGTGTAA 1065 0.4103 MGICISIASSEIHGAPKEVYDECVITFEANKVVSGNQEFCSAYSKQGTKGLNQDAASIYQGYGMEDGIFCGVFDGHGRTGRMVSNMVNRNLSSLILAQKNAFERINNIENGDSNTLNDHVDTVKGDNHKDPKNFQIWKEAVTSAFKLMDKEIKLQENLDCSCSGTTAIVVIKQGEGLIIANLGDSRAVLGTICDEELMAIQLTTDLKPGLPSEAERIRRCNGCVYALKEEPHIQRVWIPNYENSPGLAMSRSFGDFLLKEHGVIAIPDVSYYPLTSSDQFLVLASDGVWDVLSNIEVAAIVWTTKSEEEAAKKVVEAANAAWRRKYPFSKIDDCTVVCLFLKNENKRNSGMWKV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3378 354 Gene3D - 24 344 IPR036457 -
Ahy16g3378 354 PANTHER PROTEIN PHOSPHATASE 2C 72-RELATED 1 346 - -
Ahy16g3378 354 CDD PP2Cc 39 341 IPR001932 -
Ahy16g3378 354 ProSiteProfiles PPM-type phosphatase domain profile. 39 341 IPR001932 -
Ahy16g3378 354 SUPERFAMILY PP2C-like 30 343 IPR036457 -
Ahy16g3378 354 SMART PP2C_4 30 339 IPR001932 -
Ahy16g3378 354 Pfam Protein phosphatase 2C 69 320 IPR001932 -
Ahy16g3378 354 PANTHER ALPHABET, ISOFORM E-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3378 Ahy-Chr16 150693905 150697767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3378 1 346 PP2C-type Phosphatase Gene Family AT5G26010 49.008 1.08e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3378 - - aip:107605550 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3378 16 150693905 150697767 Ahy16g3378 16 150693905 150697767 ECH
Ahy16g3378 16 150693905 150697767 Ahy6g2639 6 111648597 111651778 hybridization
Ahy16g3378 16 150693905 150697767 Ahy17g3177 17 133577501 133579847 PCT
Ahy16g3378 16 150693905 150697767 Ahy8g0884 8 17128188 17130550 PCT
Ahy17g3177 17 133577501 133579847 Ahy16g3378 16 150693905 150697767 PCT
Ahy8g0884 8 17128188 17130550 Ahy16g3378 16 150693905 150697767 PCT