Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3361 ATGGCTGCTGCTGCTGCTGCTGCTCCTCCTCCTACCGAAGTTGATTCCACACAGCTCGACGTTAAGCTTTTCAACAGATGGAGCTTCGACGACGTCCAGGTGACTGATATCTCCCTGGCTGATTACATTGGAGTCGCGCCGTCGAAGCATGCGACGTACGTTCCCCACACCGCCGGTAGGTACTCGGTGAAGCGTTTCAGGAAGGCACAGTGCCCGATCGTAGAGAGGCTCACTAACTCCCTCATGATGCATGGAAGAAACAACGGTAAGAAGCTTATGGCTGTTAGGATCATCAAACACGCCATGGAAATCATTCACTTGCTTACCGACCAGAACCCTATCCAAGTCATCGTTGATGCCGTTATCAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGGTCTGCTGGAGTTGTTAGGAGGCAGGCTGTTGATATCTCGCCTCTTCGCCGTGTCAATCAGGCCATCTATCTTCTAACAACAGGTGCACGAGAAGCTGCTTTCAGGAACATTAAGACAATTGCCGAATGCTTGGCTGATGAACTTATTAATGCAGCAAAAGGTTCATCGAATAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCTAATCGTTAA 630 0.4921 MAAAAAAAPPPTEVDSTQLDVKLFNRWSFDDVQVTDISLADYIGVAPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3361 209 Gene3D Ribosomal protein S7 domain 3 209 IPR036823 -
Ahy16g3361 209 CDD uS7_Eukaryote 22 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Ahy16g3361 209 Pfam Ribosomal protein S7p/S5e 63 209 IPR023798 -
Ahy16g3361 209 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 209 IPR000235 GO:0006412
Ahy16g3361 209 PANTHER RIBOSOMAL PROTEIN S7 6 209 IPR000235 GO:0006412
Ahy16g3361 209 TIGRFAM uS7_euk_arch: ribosomal protein uS7 21 209 IPR005716 GO:0003735|GO:0006412|GO:0015935
Ahy16g3361 209 SUPERFAMILY Ribosomal protein S7 22 209 IPR036823 -
Ahy16g3361 209 PANTHER 40S RIBOSOMAL PROTEIN S5 6 209 - -
Ahy16g3361 209 ProSitePatterns Ribosomal protein S7 signature. 75 101 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3361 Ahy-Chr16 150523753 150526386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3361 20 209 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.684 4.73e-136 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3361 K02989 - gmx:100815850 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3361 16 150523753 150526386 Ahy16g3361 16 150523753 150526386 ECH