Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3294 ATGGAATTCCCCTATTCTTCTTTGCAAATCACTCCCATTGAAGAAGAGTTTGATTTGGGTGATTGCTTCTCCATCATCTTCAATTGCACCAAAAAATTGATCCAAATTATTGAAAGCTCAAACCCAGGTCCTGAGGTTCAGTCTTCTTCTACTACAAGTACAGCCACGGAAGCAATCTTGGTTCCTTCAGACATCCTATGGAGTGGTACTCCACTCACAGAGCTCAGCAGAGAAGACACAATCTTGTTACATGAAATCTGTTCTTCACTAAGTGTGTCTCCTGAGCTATTAGACCAAATTTTACCTGACATAGTCGAAACTGCAAGAAGGTGTGACTCCAACACGCGAGAGATTGTTGTGAACCTTCACGTTACCTCGTACAATGTTGTTCAAGATTCTGATGAGCAAGATGATGATGCTGAATGCGCCATATGCTTGGAGAAGTTTGACCATGGTAATGAAGATTCAAGCGTAGAAATTGTTCGTACAAATTGCAAGCATGTTTTTCATGATCGCTGCTTGCTCCCCTGGCTCCGACGCTGTGCCAACTGTCAGTCACCATATTCTTGTCCATTGTGCCGCAGCATCCTCATATTTCCAACTTCACAGATAGATGATGAATAG 624 0.4263 MEFPYSSLQITPIEEEFDLGDCFSIIFNCTKKLIQIIESSNPGPEVQSSSTTSTATEAILVPSDILWSGTPLTELSREDTILLHEICSSLSVSPELLDQILPDIVETARRCDSNTREIVVNLHVTSYNVVQDSDEQDDDAECAICLEKFDHGNEDSSVEIVRTNCKHVFHDRCLLPWLRRCANCQSPYSCPLCRSILIFPTSQIDDE* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3294 207 Pfam Ring finger domain 141 194 IPR001841 -
Ahy16g3294 207 ProSiteProfiles Zinc finger RING-type profile. 142 194 IPR001841 -
Ahy16g3294 207 SUPERFAMILY RING/U-box 130 202 - -
Ahy16g3294 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 198 IPR013083 -
Ahy16g3294 207 PANTHER RING ZINC FINGER PROTEIN-RELATED 110 202 - -
Ahy16g3294 207 SMART ring_2 142 193 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3294 Ahy-Chr16 149837538 149838161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3294 131 203 C3H Transcription Factor Family AT3G58720 34.247 1.08e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3294 - K11982 adu:107495458 338.576